New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_021214	804804 =	395 (1.220)	7 (0.020)	4/412	20.8	2.0%	coding (554/603 nt)	TMARI_RS03980	hypothetical protein
	?	NC_021214	1044289 =	338 (1.160)					intergenic (+117/‑73)	TMARI_RS05230/TMARI_RS05235	hypothetical protein/transposase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/805062‑804804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacagaaccccaaccacgcaagcTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCG  >  NC_021214/1044289‑1044524                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTCCTCAAAGTGATCATAGACCGTGGAGTCTGCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAC                                                                                                                                                                                                                                                                  <  2:299962/239‑1 AGGTCCTCAAAGTGATCATAGACCGTGGAGTCGTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAC                                                                                                                                                                                                                                                                  <  1:1299684/239‑1 AGGTCCTCAAAGGGATCATAGACCGTGGAGTCTGCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAC                                                                                                                                                                                                                                                                  <  2:1277220/239‑1  GGTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGTATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGACAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAta                                                                                                                                                                                                                                                                 >  2:1064356/1‑237  GGTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTTATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACA                                                                                                                                                                                                                                                                 >  2:624547/1‑239  GGTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACA                                                                                                                                                                                                                                                                 >  1:1176898/1‑239   GTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGTCAAACTTTATCCTCGAGTGCAACCTGAAGAGAGACGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGACGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGCGCGGTATATATATTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGGTTCAAATTGATTGACgg                                                                                                                                                                                                                                                                >  2:753783/1‑237   GTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAG                                                                                                                                                                                                                                                                >  1:1034568/1‑239    TCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAG                                                                                                                                                                                                                                                                <  2:68297/238‑1          AAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGAAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCA                                                                                                                                                                                                                                                         <  1:389604/239‑1           AGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAA                                                                                                                                                                                                                                                        <  2:1278948/239‑1           AGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAA                                                                                                                                                                                                                                                        <  1:552740/239‑1           AGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAA                                                                                                                                                                                                                                                        <  1:245524/239‑1             TGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACC                                                                                                                                                                                                                                                      >  2:387168/1‑239             TGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACC                                                                                                                                                                                                                                                      >  1:359776/1‑239              GATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCCGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAAAGAACCCCAACC                                                                                                                                                                                                                                                      >  2:882448/1‑238              GATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACGTGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACC                                                                                                                                                                                                                                                      >  2:611198/1‑238              GATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACC                                                                                                                                                                                                                                                      >  2:387392/1‑238              GATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACC                                                                                                                                                                                                                                                      >  1:218336/1‑238               ATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGCAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCAC                                                                                                                                                                                                                                                    >  2:449111/1‑239                TCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACG                                                                                                                                                                                                                                                   <  1:1328296/239‑1                TCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACG                                                                                                                                                                                                                                                   <  2:979017/239‑1                TCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACG                                                                                                                                                                                                                                                   <  1:113679/239‑1                TCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCAC                                                                                                                                                                                                                                                    >  1:260363/1‑238                TCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCAC                                                                                                                                                                                                                                                    >  1:668566/1‑238                   TAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAA                                                                                                                                                                                                                                                >  1:17274/1‑239                    AGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAG                                                                                                                                                                                                                                               <  1:252672/239‑1                       CCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATATGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGC                                                                                                                                                                                                                                              <  2:771642/237‑1                         GTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACG                                                                                                                                                                                                                                                   >  2:38633/1‑230                         GTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACG                                                                                                                                                                                                                                                   <  1:38633/230‑1                          TGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGCAAACAGTAGTTTCAAATTGAGTGACAGAACACCAACCACGCAcgacatc                                                                                                                                                                                                                                          >  2:949860/1‑231                          TGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCAAGCAAGacaac                                                                                                                                                                                                                                          >  2:278121/1‑233                                   CACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACTTA‑‑CTATCCTCCTTCAGGGg                                                                                                                                                                                                                              <  1:46283/239‑2                                                TGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAC                                                                                                                                                                                                                                                                  >  2:40993/1‑192                                                TGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGAC                                                                                                                                                                                                                                                                  <  1:40993/192‑1                                                                                                                                        aagGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATAC                                                                                                                             <  2:834524/234‑1                                                                                                                                                                                tccCAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCA                                                                                                                           <  2:1352830/196‑1                                                                                                                                                                                TCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCA                                                                                                                           >  1:1352830/1‑199                                                                                                                                                                                                 GTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAA                                                                                                                                                                                                                                                        <  1:861099/57‑1                                                                                                                                                                                                 GTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAA                                                                                                                                                                                                                                                        >  2:861099/1‑57                                                                                                                                                                                                                              AGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGCTATCCCCCTTCAGGGGGATAGTAAGTGGTTGTTGTAGTTAAACTGTGTTACAATTAGCACAGGGAGTGGGAAAATGCCCGGACGTGTGATACGAACCTACAAACTCGCCGTACCAGGACACCTGAGTCAAACATGCGAAGAACTCAACCGCACTGCAGCAAGAATCTACAACAAAACGATGTCTATTGTGCGAAAGA                                         <  2:201839/235‑1                                                                                                                                                                                                                                            TGACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATAC                                                                                                                             >  1:933204/1‑137                                                                                                                                                                                                                                            TGACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATAC                                                                                                                             <  2:933204/137‑1                                                                                                                                                                                                                                              ACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCT                       >  2:88398/1‑237                                                                                                                                                                                                                                              ACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCT                       >  1:648601/1‑237                                                                                                                                                                                                                                              ACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGT                                                 >  1:1081705/1‑211                                                                                                                                                                                                                                              ACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGT                                                 <  2:1081705/211‑1                                                                                                                                                                                                                                              ACAGAACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCCCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTAAAACAAAACGATGATACTTGCGCCAAAGATACAACAAAAAAAAGACTT                      >  2:1373668/1‑238                                                                                                                                                                                                                                                  AACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGC                 <  1:1350909/239‑1                                                                                                                                                                                                                                                   caCCCAACCACGCAAGCTAGTCTCCTTCAGGGAGATAGTAGGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGG                  <  2:1174108/235‑1                                                                                                                                                                                                                                                   ACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGC                 <  2:1361516/238‑1                                                                                                                                                                                                                                                   ACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTG                   >  1:140510/1‑236                                                                                                                                                                                                                                                   ACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCATCCGGCa                >  2:139705/1‑238                                                                                                                                                                                                                                                   ACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAA                                                                                                                                       >  1:1253246/1‑120                                                                                                                                                                                                                                                   ACCCCAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAA                                                                                                                                       <  2:1253246/120‑1                                                                                                                                                                                                                                                      tCAACCACGCAAGCTATTCTCCGTCAGGGAGAAAATAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTC             <  1:984775/238‑1                                                                                                                                                                                                                                                       CAACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGT              >  1:934110/1‑237                                                                                                                                                                                                                                                         ACCACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTAGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCACAGACGTGTGATCAGAACCTACAAACTCGCCATACCAGGACCTTTGACTCAAATAAGCGACGAACTCAACCGCATCGCACCAAGAATCTTCAACAAAACGATGTCTCTTGTGCAAAAGATACCCCAAAAGAAAGGCGTCTGGATGACCca          >  2:1111917/1‑237                                                                                                                                                                                                                                                            ACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCC       <  1:956235/239‑1                                                                                                                                                                                                                                                            ACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGC        >  1:272353/1‑238                                                                                                                                                                                                                                                            ACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGC        >  1:503728/1‑238                                                                                                                                                                                                                                                            ACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGA                                                                                                                                                                                                    <  1:118897/50‑1                                                                                                                                                                                                                                                            ACGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGA                                                                                                                                                                                                    >  2:118897/1‑50                                                                                                                                                                                                                                                             CGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCC      >  1:745747/1‑239                                                                                                                                                                                                                                                             CGCAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCC      >  1:961133/1‑239                                                                                                                                                                                                                                                               CAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCA     >  1:205380/1‑238                                                                                                                                                                                                                                                               CAAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCA     >  1:115705/1‑238                                                                                                                                                                                                                                                                AAGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCAC    <  2:361230/238‑1                                                                                                                                                                                                                                                                 AGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCG  <  1:328545/239‑1                                                                                                                                                                                                                                                                 AGCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCG  <  1:37345/239‑1                                                                                                                                                                                                                                                                 AGCTAGTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCG  <  1:151340/239‑1                                                                                                                                                                                                                                                                  GCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAA                                                                             >  2:639705/1‑163                                                                                                                                                                                                                                                                  GCTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAA                                                                             <  1:639705/163‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTCCTCAAAGTGATCATAGACCGTGGAGTCTTCACTCCAGGAGAGTGGACAAACTTTATCCTCGAGTGCAACCTGAAGAGAGAAGGATCTGCAGAGGGAAGAGTGTACTTCAGACTGTCCGAAGATGGAAAGAAAAGTTTCTACGTGATTTTCTCAGAGTGCGGTATATCTCTTCACAAGTTCGCAGGAAGTATAGACATGAAGATAGCGGAAAACAGTAGTTTCAAATTGAGTGACAGAACCCCAACCACGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_021214/805062‑804804 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacagaaccccaaccacgcaagcTATTCTCCTTCAGGGAGATAGTAAGTGGTTGTTGTAGCTCGACTGTGTTACAATTAGCACAGGGAGCGAGAAAATGCCCAGACGTGTGATACGAACCTACAAACTCGCCATACCAGGACATTTGAATCAAATATGCGAAGAACTCAACCGCATCGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCAAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCG  >  NC_021214/1044289‑1044524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.