Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_021214 | 693,637 | 0 | C | T | 24.9% | 311.8 / 68.9 | 204 | E233K (GAG→AAG) | TMARI_RS03400 | cysteine synthase A |
Reads supporting (aligned to +/- strand): ref base C (63/88); new base T (49/1); total (115/89) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.65e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.71e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 214 total aligned reads displayed.
TTTCCATACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGTCTATCTGATAGTCCAT > NC_021214/693400‑693874 | tttcCATACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCTGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGtcctc > 2:835376/1‑238 (MQ=255) tcCATACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCGGCGACGTTGGCACCGGAAGAGATCCCTACGAGACGTCCCTCTTTTTTTGCCAGGTACCTGGCCCTCTCGTGGGCC‑TGCTCGTCCTCCAc > 2:343124/1‑239 (MQ=255) aTACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGCGGTACCTCGCCCTCTCGCAGGAC‑TCGTCGTCCTCCACggg > 2:781456/1‑238 (MQ=255) aTACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTACCTCTTTTTTTGCGAGGTACCTCGCCACCCCGTAGGCC‑TCTTCGTCCTCCACCGt > 2:187027/1‑239 (MQ=255) acacTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCt > 1:273854/1‑239 (MQ=255) cacTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCTTCGTCCTCCACGGAAATCACTTCGTCTa > 1:521285/1‑239 (MQ=255) cacTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTa > 1:991994/1‑239 (MQ=255) cacTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTa > 1:81875/1‑239 (MQ=255) cacTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGGATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTATGGCCCGAGATTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGAACCGGAAGAGATCCCTACGAGAAGGCCCTCTTTTGTTGCGAGGTATCTCGCCATCTCGTAGGCA‑TCGTCATCCTCCACGGTGATACCTTcagtta > 2:761764/1‑234 (MQ=255) cacctTCGGATTTAAAAAGCAAAGCGTACGTTCCCTTCATAGGATCCTCAGGTATCTTGCCGCGTGGACCGGTGCAACGGTCACAACCCTCGCCTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGCAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCa < 2:45648/236‑1 (MQ=255) tctTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGAGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATTACTTCGTCTactatg > 2:710569/1‑234 (MQ=255) tctTCGAGTTTCAAAAGCAAAACGCAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACACCCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGACTGCGACGTTGGCACCAGAAGAGATCCCTACGAGAAGACCATCTTTTTTTGCGAGGTACCTCGTCATCTCGTATGCC‑TCCACTTCTTCCACGGACACCACTCCGTCTATCaac > 2:1074142/1‑237 (MQ=255) ttCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTCACAAAAAACACCTCGTCTATCAAGGa > 1:800765/1‑239 (MQ=255) tCGATTTTCAAAAGAAAAACGTAGGTGCCCTTCTTGAGATGTCCAGTTATCTTTCCCCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGAt < 2:1394891/239‑1 (MQ=255) tCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTTTCTCTCCACGTGCTCCGGTGCAACGGTCACACCCCTCGCGTCTGGCCCTAGGTTCTGGGCTACTTTCAAAGCTGCTGCGCCGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGAt < 2:1130415/239‑1 (MQ=255) tCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGAt < 1:390619/239‑1 (MQ=255) tCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCTTTGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCa > 1:316191/1‑239 (MQ=255) tCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCa > 1:288706/1‑239 (MQ=255) aaaaGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGa < 1:498767/210‑1 (MQ=255) aaaaGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGa > 2:498767/1‑210 (MQ=255) aaaaGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAgg < 2:261703/239‑1 (MQ=255) aaaaGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAgg < 1:26383/239‑1 (MQ=255) aaaaGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑GCCTCCTCCTTCACGGAGATCACTTCGTCTATCACGGATCTGTCCAgg > 1:1027984/1‑239 (MQ=255) aaaaGCAAAACGTAAGTTCCCGTCATAGGATGCTCAGTTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCGCGCGTCGGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAgg < 2:183459/239‑1 (MQ=255) gTAAGTTCCCTTCATAGGATACTCAGGTATCTTCCCGCGTGGTCCGGTGCAACCGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAAc < 1:250700/239‑1 (MQ=255) ttCCCTTCATAGGATACTCAGGTATCTTTCCGCGGGGTCCGGTGCAACGGTCACACCCCGCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCGGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCtt < 1:206657/228‑1 (MQ=255) taccgtgaTAGGATCCTCCGGTATCTTTCCGCGTGGTCCGGTGCAACTGCCACACCCCTCGCGCCTGGCCCGAGTTTCTGCGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGGTCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTGCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 2:469709/232‑1 (MQ=255) tCCCTTCTTAGGCTACGCGGGTACTCTTCCCCTTGCGCCGGTCCACCGGTCACACACCTCAGTTCTGGCCCCTATTTCTGGGCTTATTTCACAGCGGCTGAGACGTTGGCACCGGCAGAGATCCCTACGAGAAGTCCCTCTTTTTTGGCGAGGTACCTCGCCCTCTCGTAGGCC‑TCTTCGTCCTCCACGGTGAGCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 2:1230942/239‑1 (MQ=255) tCCCTTCATAGTATACTCAGGTATCTTTCCGCGTGGTCCAGTGCAACGGTCACCACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 1:1168202/239‑1 (MQ=255) tCCCTTCATAGGATTGTCATGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACACCCCTCTCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 1:1038941/239‑1 (MQ=255) tCCCTTCATAGATTACCCGGGTATCTTGCCGCTTGGTCCGGTGCAACGGCCACACCCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 2:244026/239‑1 (MQ=255) tCCCTTCAGAGGCTACTCTGTCATCTGTCCGCGTTGCCCGGTGAAACGGTCACCACCCTCGCGTCTGGCCCGAGTTTCGTGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTCCCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCCCGGATCTGTCCAGGATCTTCGTAACAAAGcc < 2:956067/239‑1 (MQ=255) tCCCCTCATAGGATGCTCCGTTACTTCTCCGCGTGGTACAGTTCCCCGGGCACACCCCTCGCCTCTGGCCCGAGTTTCTGGGATACTTTCAAAGCGGCTGCGACGTTGGCCCCGGAAGAGGTGCCTACGCGACGTCCCTCTGTTTGTGCGAGGGACCTCGCCATCTCGGAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGAGCTGTCCAGGATCTTCGGAACAAAGcc < 2:608932/239‑1 (MQ=255) ccTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCg < 1:71770/239‑1 (MQ=255) ccTCCATAGGATACTGCGGTGCCTTTCCGCGTGGCCCGGTGCAACGGACCCAACCCTCGCGTCTGGCCCGAGTTTCCGGGCTACTTTCAAATCGGCTGAGACGTTGGCAACGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCGTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCg < 2:446546/239‑1 (MQ=255) ttCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGCGGTACCTAGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTCATCACTTCGTCTCTCACGGCTCTACCCAGGATCCTCGCAACAAAACTCGc > 2:1174231/1‑238 (MQ=255) ttCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAATAACTACGTCTATCACGGGTCTGTGCAGGGTCGGCGGAACCAAGGCCGc > 1:1205211/1‑238 (MQ=255) ttCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAACTTAGTCTTTCACGGTTCAGTACACGTTCTTCGGAACAAAGACCGc > 1:962036/1‑238 (MQ=255) cATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAACTTCGTCTATCACGGATCTGTCCAGGACCTTCGGAACAAAGCCCGCt > 1:544328/1‑237 (MQ=255) aGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCtat < 1:725400/239‑1 (MQ=255) aTACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTCCTCCTTGAAAAAGATAACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATAc > 1:722223/1‑238 (MQ=255) aTACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑CCCTTCTGCTCGACGAAGAACATTTCGCATATCACGGATCTGGCCAGGAGCTTCGGAACAAAGCCAGCTCCtatag > 1:152302/1‑237 (MQ=255) aCTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCTTCGTCCTCCACGGAGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATAc > 1:897070/1‑236 (MQ=255) ggTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTTCTGCTTGAAAAAAAACACTTCGTCTATCACGGATCTGTCCAGGATATTAGGAACAAAGCCCGCTCCTATACGCTAGAta > 1:880605/1‑238 (MQ=255) aTCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTTCTGCTTGAAAAAAAACACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCg > 1:1374813/1‑239 (MQ=255) tttCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑GCCTCGTGCTACACGTTGATCACTTCGTCTATCACGGATCTTTCCATGATCTTCGGAAAAAAGCCCGCTCCTATACCCTGGATGGCgtgt > 1:25187/1‑239 (MQ=255) ttCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGcc < 1:106093/213‑1 (MQ=255) gcgTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGACAAAAAACACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTc > 1:66286/1‑238 (MQ=255) gcgTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCTTCGTCCTTCACGGAGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTc > 1:908642/1‑238 (MQ=255) tGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGAACCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCACTCTCGTAGGCT‑TCTTCGTCCTCCACGGGAATCACTCCGGCTATCACGGATCGGTACAGGATCTTGGGAACAAAGCCCGCCCCTATACCCTGGATGGCGTGttttgtcg > 2:1068153/1‑234 (MQ=255) gTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCTTCGTCCTTGACGGAAATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCg > 1:296366/1‑236 (MQ=255) gTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTTCTGCTTCACAAAAAACACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCg > 1:932785/1‑236 (MQ=255) tccgtggCAACGGGCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCt < 1:1003338/232‑1 (MQ=255) tCCGGTGCAAAGGTCACAACCCTCGCGTCTGGCCCGATGTCCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCGCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCt < 1:853967/238‑1 (MQ=255) tGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGCGTTTTCCCGGCTGGcca > 1:1356135/1‑237 (MQ=255) aCGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCTCTCCTATCCCCTGGATGGCGTGTTTTCCCGCCTGGCCTCCaga > 1:486559/1‑239 (MQ=255) cGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGAGTTTTCCCGGCTGGCCTCCagag > 1:1193336/1‑239 (MQ=255) tgacaACCCCCGCATCTGGCCCGACTTTCTGGGCTACTTTCAAATCGGCTGCGTCGTTGGCATCGTAAGAGATCCCTACGAGAAGTCCCGCTTTTTTTTCGATGTACATCTCCCTCTCGGAGGCC‑TGTTCGTCCTCCACGGTGACAACTTCGTTGATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGTCTCCagagtgt < 2:1373303/237‑4 (MQ=255) cgcgTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTCCTCCTTGACAAAAATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAAAtt > 1:258678/1‑239 (MQ=255) cgcgTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGAtt > 1:759732/1‑239 (MQ=255) cgcgTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGCATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTGTCTCGGCTGGCCTCCAgagagacatggagtgt > 2:910677/1‑229 (MQ=255) tGGCCCGATCTTATGGCCATCTGTCAAAGCGGCTGCGACGTTAGCCACGGAAGCGATCCCTACGAGATGTCCCTCTTTTTCTGCCGGGTCCCTCGACTTCTCGTAGGCC‑TCTTCGTCCTCCCCGGTGATCACTTCGTCTATCCCGGATCGGTCCAGGATCTTCGGAACAAAGCCCGCTCCTTTACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCg < 2:556990/238‑1 (MQ=255) gggCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGACATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTCGGCC‑TCTTCGTCCTCCCCGGTGACCACTTCGTCTATCACGGATCTGTTCAGGATCTTCCGACCCAAGCCCGCTCCTCTACCCTGGACGGCGGGTTTTCCCGGCTGCCCTCCCGACAGAAAGGGAGATTTTGCgg > 2:723431/2‑239 (MQ=255) ggCTCGAGTTTCTGGGCTCGTTTCAGAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACTAAAAGTCCCTCTTTTTTGGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGCTCTGTCCAGGATCTTCGGAACAAAGCCCGCGCCTAGCCCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCggg < 2:688564/239‑1 (MQ=255) ggCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCgg > 1:829901/1‑238 (MQ=255) cccGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTTCTCCTTCACAGAGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGc > 1:1076457/1‑238 (MQ=255) cccGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGc < 1:781456/238‑1 (MQ=255) gggTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTa < 1:765959/237‑1 (MQ=255) gAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTa < 1:710569/239‑1 (MQ=255) aGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAATAACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCAGGCGGGCCTCCAGAGAGAAAGGGCGATTTTGCGGGCTCTa > 1:1202622/1‑238 (MQ=255) ttttTGGGCTTCTTTCCAGGCGGTTGAGCCGTTGGCACCTGAAGATGTCCCTCAGGGAAGTCACTCTTTTTTTGCGAGGTACCTCGCCATCTCCTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAGGCCCGCTCCTATACCCTGGATGGCGGTGTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTTCCg < 2:1027984/239‑1 (MQ=255) cTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCgacacca > 1:668300/1‑231 (MQ=255) aCTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGCAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCACGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCt > 2:394623/1‑238 (MQ=255) cTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGCAGTCCCTCTTTTTTTGCGAGGTACCTCGCCACCTCGTAGGCC‑TCTTTGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCACGCTCCTATACCCTGGATGGCGGGTTTTACCGGCTGGGCTCCAGAGAGACCGGGCGATTTTGCGGGCCCTACCGCTACTCTCtt > 2:617076/1‑238 (MQ=255) aaGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGc < 1:706995/186‑1 (MQ=255) ggCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAACACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGttt > 1:582810/1‑238 (MQ=255) gCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑TCCTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTcc > 1:122094/1‑239 (MQ=255) gCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCC‑GCCTTCTGCTTGAAAAAAATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTcc > 1:190147/1‑239 (MQ=255) agaTCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCt < 2:925927/128‑1 (MQ=255) agaTCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCt > 1:925927/1‑128 (MQ=255) agaTCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGTGAACGGGAGATTTTGCGGGCTCTACAGCTACTATCTTCACTCCGTTTCCAAAGAAGGCTTTCAAAACCCt > 2:286762/1‑238 (MQ=255) tACGAGAAGTCCCTATTTTTTTGCGGGGTACCTCACCATCACGTAGGCC‑TATTATGCCAACACCGAGATCACTTCATCTATCACGGATATGTCCAGGCTCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGCGTTTTCCCGGCTGGCTTCCAGAGAGAACTGGAGACTTTGCGGTCGCTGCAGCTACTCTCTTCACTCCCTTTCGAAAGAAGCCTTGCAAAACCCtctaccct > 2:756888/1‑231 (MQ=255) gagaTGTCCCTCTTGTTTTGCGAGATACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCg < 1:453467/238‑1 (MQ=255) aGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTATGCCGTCTTC‑TGCTTGAAAAAAAAAAATTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGa > 1:686154/1‑238 (MQ=255) ctctTTTTTGGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGc < 1:840946/239‑1 (MQ=255) tctTTTTTTGCCAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGGCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGctac < 2:868882/179‑1 (MQ=255) aGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGc > 2:642300/1‑156 (MQ=255) gTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATCTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACt > 2:80929/1‑238 (MQ=255) aCCTCGCCCTCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTcc < 1:1072968/238‑1 (MQ=255) cTCGCCATTGCGTCAGCA‑TCTCCTGCCTCTCCGGTTATCCCTTCGTCAATCACGTATATGTCCAGGATCCGGAGAACAAAGCCCGATCCACTACCCTGTATGCCTTGTTTTCCTGGCGGGCCGCCAGAGAGAAAGGGAGATTTTGCGGGCTCGACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTGTCAAACCACTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCcgc < 2:269286/239‑1 (MQ=255) tctcGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAg > 2:1275443/1‑239 (MQ=255) tctcGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCAAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAg > 2:942347/1‑239 (MQ=255) tcGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTAGCGCGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCGTCCCACTCCGCTGATCGTGCCTCCCGTCCCCACTCCCGCGACGAAGGc < 1:895751/239‑1 (MQ=255) gTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCCCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCCTTCCCACTCCCGCGACGCAAGCg > 2:1380442/1‑238 (MQ=255) gTAGGCC‑TCTTCCTCCTCCACGGTGATCACTTCGTCTATCACGGCTCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATCCCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGt < 1:40512/239‑1 (MQ=255) ctTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTTCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCTGTCCCCACTCCCTCGCCGCAGGCGTCTATCTgt > 2:1326999/1‑238 (MQ=255) cGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGTCTATCTGATAg > 1:1095004/1‑239 (MQ=255) ctcctccACGGTGATCCCTTCGTCTATCCGGTATCGGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGTCTATCTGATAGt < 1:910677/238‑1 (MQ=255) cctccACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGATCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCCCTCCGCTGATCGCGCCGCCCGTGTCCACTCCCGCGACGAAGGCGTCTATCTGAtctcc > 2:825415/1‑234 (MQ=255) tccACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGTCTATCTGATAGTCCa > 1:22100/1‑238 (MQ=255) | TTTCCATACCTCAAAGCAACACTCTCTTCGAGTTTCAAAAGCAAAACGTAAGTTCCCTTCATAGGATACTCAGGTATCTTTCCGCGTGGTCCGGTGCAACGGTCACAACCCTCGCGTCTGGCCCGAGTTTCTGGGCTACTTTCAAAGCGGCTGCGACGTTGGCACCGGAAGAGATCCCTACGAGAAGTCCCTCTTTTTTTGCGAGGTACCTCGCCATCTCGTAGGCC‑TCTTCGTCCTCCACGGTGATCACTTCGTCTATCACGGATCTGTCCAGGATCTTCGGAACAAAGCCCGCTCCTATACCCTGGATGGCGTGTTTTCCCGGCTGGCCTCCAGAGAGAACGGGAGATTTTGCGGGCTCTACCGCTACTATCTTCACTCCGTTTCCAAAGAAGCCTTTCAAAACCCTTCCCACTCCGCTGATCGTGCCTCCCGTTCCCACTCCCGCGACGAAGGCGTCTATCTGATAGTCCAT > NC_021214/693400‑693874 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |