New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_021214 | 859217 = | 244 (0.870) | 6 (0.020) | 5/388 | 12.8 | 2.6% | coding (1544/1911 nt) | TMARI_RS04265 | DNA gyrase subunit B |
? | NC_021214 | 859476 = | 218 (0.820) | coding (1803/1911 nt) | TMARI_RS04265 | DNA gyrase subunit B | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
Only 100 of 247 total aligned reads displayed.
AAACAGGCCAGAGACAGAGAATTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGAAACGAGAAAAATCA > NC_021214/858979‑859456 | aaaCAGGCCAGAGACAGAGAATGTCAGGCTGTTCTTCCCATAAGAGGAAAGATTGTGAACGTTGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTGAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACActc < 2:159834/240‑1 (MQ=255) gagacagagaATTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATCCGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCAAACATAAGAACTCTCCTTCTGACACCCTCCTATAGAt > 2:788741/1‑240 (MQ=255) aTTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAATGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGAc > 1:1216138/1‑239 (MQ=255) aTTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGAc > 1:502798/1‑239 (MQ=255) aTTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGAc > 1:1187443/1‑239 (MQ=255) ttCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGCCACTCTTCTATAGATACATgaga > 2:202289/1‑236 (MQ=255) ttCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATgaga < 1:202289/236‑1 (MQ=255) actttatgcccATAAGAGGAAAGAAGGTGAACGTGGAAAAATCATCTAACTATAGATTACTGAAAAACGAGCATGTCAGTGACATAATTGGTGAAGTGGGAACGGGCATAGGAGATGATTGCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGCCCGACGCCTATATAGACGGTGCACACATAAGAACGCTCCTTCTGACCCTCTTCTATAGATACATGAGTCCCCTCAt < 2:771552/230‑1 (MQ=255) ttcttcCCATAAGAAGAAAGATTTTGAACGTTGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAc < 2:288407/240‑1 (MQ=255) tcttcCCATAAGAGGAAAGATTTTGAACGTTGAAAAAGCATCTCTCGATAGATTTATGAAAAACTAGCAGATCAGTGACATACTTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCTACGAAAGCAAGATCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGATCTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAc < 2:730846/239‑1 (MQ=255) ctaaaagaagAAAGATTTTGAACGTCGAAAAATCATCTCTCGCTAGATTAATGAAAAACGAGCATATCAGTGACAGAATTGTTGCAGTGGGAGCGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGTCCGACGCCGATATAGACGGTGCACACATAATAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:1172156/236‑1 (MQ=255) ccATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:1136136/240‑1 (MQ=255) ccATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGGGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:1099819/240‑1 (MQ=255) tAAGAGGAAAGATTTTGAACGTAGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggcaggg < 2:735277/240‑1 (MQ=255) ggAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACtcttc > 2:569369/1‑198 (MQ=255) ggAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACtcttc < 1:569369/198‑1 (MQ=255) ggAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGta > 1:808886/1‑237 (MQ=255) ggAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGta < 2:808886/237‑1 (MQ=255) aGATTTTGAACGTGGAAAAAGCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAg < 2:434801/240‑1 (MQ=255) tttGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAc < 2:1179424/218‑1 (MQ=255) gTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATAc > 1:1164069/1‑225 (MQ=255) gTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACAGACGCCGAAAAAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGAAACATGAGACCCCTCATCGAACAGGGCAGGGTATAAATAGAAATCCGAcc > 2:590951/1‑239 (MQ=255) ctctcGATAGATTACTGAAAAACGGGCAGATCAGGGACATAATGTTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCa < 2:103272/240‑1 (MQ=255) ctctcGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATgag < 2:819901/184‑1 (MQ=255) ctctcGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGAccc < 1:62712/188‑1 (MQ=255) gATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:856689/195‑1 (MQ=255) gATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca > 1:856689/1‑195 (MQ=255) gATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTc > 2:1317522/1‑212 (MQ=255) gATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTc < 1:1317522/212‑1 (MQ=255) ttACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGgaag < 1:365529/239‑1 (MQ=255) tACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATAc < 2:658119/167‑1 (MQ=255) tACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATAc > 1:658119/1‑167 (MQ=255) tACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGgaagag > 1:900752/1‑240 (MQ=255) cTGAAAAGCGAGTAGATCAGTGTCATAATTGTTGCGGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAAGGACGGTATGATTACCATCATGACCGACGCCGATATAGGCGGTGCACACATAAGACCTCGCCTTCTGACACTCTACTATAGTTACAGGAGACCCCTCAGCGAACAGAGCAGGGTATACATAGCACTCCCACCTCTCTTCAGGATCAAAGCTGgaagagaa < 2:1041281/240‑1 (MQ=255) aTCAGTCACATAATTGTTGCAGAGGGAACGGGCATAGGAGAAGATTTCGAAGAAAGCAAGCTCAAATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGgaagagaag < 2:437353/226‑1 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggcaggg < 1:1046617/169‑1 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca > 1:404167/1‑166 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACg > 1:437353/1‑226 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAg > 1:1334941/1‑240 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAg > 2:1010351/1‑240 (MQ=255) aTAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGACTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:404167/166‑1 (MQ=255) tgttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGa > 1:1253550/1‑237 (MQ=255) tgttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGa > 2:1297452/1‑237 (MQ=255) tgttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCt < 1:1010351/240‑1 (MQ=255) tgttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCt < 1:831651/240‑1 (MQ=255) gttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCtata < 1:232477/130‑1 (MQ=255) gttgCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCtata > 2:232477/1‑130 (MQ=255) aGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCgg < 1:346139/239‑1 (MQ=255) gggAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCt > 2:358550/1‑209 (MQ=255) gAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGa > 1:941081/1‑122 (MQ=255) aCGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACaa < 2:251002/239‑1 (MQ=255) gCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTTACCAGGAGCTGGCGGAATACAAAgaga > 1:293230/1‑240 (MQ=255) agaTGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACa < 1:581413/167‑1 (MQ=255) atgatTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACtcttc < 2:156879/101‑1 (MQ=255) atgatTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACtcttc > 1:156879/1‑101 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACtcttc > 2:1215366/1‑95 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 1:731508/129‑1 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCt < 1:52026/186‑1 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGaaaaa < 1:788741/240‑1 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGaaaaa > 1:212751/1‑240 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGAAGCTGGCGGAATACAAAGAGAAAATCCAGGGaaaca > 2:395699/1‑238 (MQ=255) tCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGAACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCt > 2:52026/1‑186 (MQ=255) gaAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATc < 1:613199/240‑1 (MQ=255) aagcTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCAATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTTACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAAt < 2:293230/239‑1 (MQ=255) ataaacgacagaGGAGTATAATCATGACCGACGACGTTATAGCCGGGGCACACATAAGAACTCTCCTTCTGACACTCTGCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAAc < 2:943219/229‑1 (MQ=255) gATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGaa < 2:1124056/208‑1 (MQ=255) ggTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACaaa > 2:527153/1‑240 (MQ=255) gTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 1:107906/105‑1 (MQ=255) aGGATTAACATCATGACCGACGCCAATATAGACGGTGAACCCATAAGAACTCTCCTTCTGACCCTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAgg < 2:1253550/239‑1 (MQ=255) gATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca < 2:1209738/101‑1 (MQ=255) gATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca > 1:1209738/1‑101 (MQ=255) aTTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACt < 1:1174898/239‑1 (MQ=255) atcatcATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca > 1:568452/1‑97 (MQ=255) atcatcATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGc > 2:344278/1‑240 (MQ=255) atcatcATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGc > 1:939524/1‑240 (MQ=255) tcatcaTGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCg < 1:667414/240‑1 (MQ=255) catGACCGACGCCGATATATACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACCGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATCCAAAGAGAACATCTAGGGCAAAAGGATCGAAATTCAACGGTACAACGGACATGGCGAGAt > 2:22122/1‑240 (MQ=255) ccGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCt > 2:1075770/1‑166 (MQ=255) aCGCCGATATAGACGGTGCACACATAAGAACTCTCCTGCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGgaagagaa < 1:1309110/134‑1 (MQ=255) cGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAAACCTGagaa > 2:650281/1‑238 (MQ=255) tataGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGagcagc < 1:1126982/239‑1 (MQ=255) cGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGa > 1:26238/1‑240 (MQ=255) cGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGa > 1:467065/1‑240 (MQ=255) gTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCAt < 2:615687/58‑1 (MQ=255) gTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGaaa > 1:910227/1‑240 (MQ=255) gTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGCCGAGATGAATCCTGAGCAGCTCTGGGaaa > 2:576611/1‑240 (MQ=255) gCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACA‑AGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACaaa > 2:1243089/1‑200 (MQ=255) gCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACA‑AGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACaaa < 1:1243089/200‑1 (MQ=255) acccaTAAGAACTCTCCTTCTTGCTCTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAaacaa < 2:917276/236‑1 (MQ=255) aaGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcaggg > 2:471415/1‑57 (MQ=255) aaGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTccc > 2:492191/1‑78 (MQ=255) ctcCTTCTGACACTCTTCTATAGGTACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGCACAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGaa > 1:375479/1‑240 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAAcagggca > 2:833905/1‑52 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAg < 1:758195/119‑1 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACaaa > 1:840152/1‑144 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGaa > 2:567012/1‑240 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGaa > 1:169300/1‑240 (MQ=255) ctcCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGaa > 2:272098/1‑240 (MQ=255) cTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGAAACg < 1:475742/240‑1 (MQ=255) tcttctGTAGATTCATGAGGCCCCTCAACGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAATAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGTCTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGAAACGAGAAAAATCa < 1:818502/240‑1 (MQ=255) | AAACAGGCCAGAGACAGAGAATTTCAGGCTGTTCTTCCCATAAGAGGAAAGATTTTGAACGTGGAAAAATCATCTCTCGATAGATTACTGAAAAACGAGCAGATCAGTGACATAATTGTTGCAGTGGGAACGGGCATAGGAGATGATTTCGACGAAAGCAAGCTCAGATACGGTAGGATTATCATCATGACCGACGCCGATATAGACGGTGCACACATAAGAACTCTCCTTCTGACACTCTTCTATAGATACATGAGACCCCTCATCGAACAGGGCAGGGTATACATAGCACTCCCACCTCTCTACAGGATCAAAGCTGGAAGAGAAGAGTTCTACGTTTACAGTGACCAGGAGCTGGCGGAATACAAAGAGAAACTCCAGGGAAAAAGGATCGAAATTCAACGGTACAAAGGACTTGGCGAGATGAATCCTGAGCAGCTCTGGGAAACAACGATGAATCCAGAAACGAGAAAAATCA > NC_021214/858979‑859456 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |