Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_021214 | 825,745 | 0 | C | T | 22.5% | 263.7 / 20.3 | 122 | P81S (CCC→TCC) | TMARI_RS04110 | histidinol‑phosphatase |
Reads supporting (aligned to +/- strand): ref base C (12/81); new base T (27/0); total (41/81) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.36e-18 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 123 total aligned reads displayed.
GATAGACATGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGCCCTTG > NC_021214/825507‑825979 | gATAGACATGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTc > 2:619104/1‑239 (MQ=255) cATGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATgg > 1:1102904/1‑240 (MQ=255) cATGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTGTTTTCCG‑ATgg > 1:578754/1‑240 (MQ=255) aTGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGt < 1:1152774/240‑1 (MQ=255) tGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGtt > 2:253360/1‑240 (MQ=255) tGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGGTTTTGCCC‑ATgggt > 2:982286/1‑238 (MQ=255) cTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACCTAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAGATACGATATTACGAAGGGAGCGCAGATCAGCTGGGAGGGTGAGGGTGAGCCGGTTTTTCACggcggcttttc > 2:822873/1‑229 (MQ=255) cTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGAc < 2:1150555/240‑1 (MQ=255) cTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGAc < 1:81117/240‑1 (MQ=255) ttCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACt < 1:1269550/240‑1 (MQ=255) cACTCCACGTTCTCCTACGCTGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGAACTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGGGGGAGAGGAGGTGTTTCTCG‑ATGGttttgcgta > 2:1152774/1‑233 (MQ=255) tCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCGCGTGGTTTcactaacct > 2:1154108/1‑232 (MQ=255) ccACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGTTTTGACTACct > 1:161136/1‑238 (MQ=255) aCGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCC‑ATGGGTTCGACTACcttctt > 1:60578/1‑240 (MQ=255) aCGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACcttctt < 2:1102904/240‑1 (MQ=255) aCGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTGTTTTCCC‑ATGGGTTCGCACACcttctt > 1:1148239/1‑240 (MQ=255) aCGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGGTTGTTGCG‑ATGGGTTTGACTACattcct > 2:835691/1‑238 (MQ=255) tctcCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGCTTTTTCCG‑GTTGTTTTTTGCACCTTCTTC‑TTg > 2:1237367/1‑240 (MQ=255) ccTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGa < 1:160809/240‑1 (MQ=255) cTACGATGGGAACTCGGGACTAGACGGACTAAGCTATCCTGTGCAGAAGCTCGGTATCGAACCTTTCTGTAGCACGGATCCCTACGAAGACGAAAACGGTGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGTGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGAt < 2:729885/240‑1 (MQ=255) cTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGAt < 1:928266/240‑1 (MQ=255) aTGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGGTTTTCCCC‑ACGGGTTTGACTCACTTTTTCTTTGGGATaatc > 1:488580/1‑237 (MQ=255) aaGGCGGAAATAGGCGACATAATCGCGCAGGTGCAGAAGCGCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTa < 2:717235/239‑1 (MQ=255) aaGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTa < 1:161537/239‑1 (MQ=255) aaGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTa < 1:354487/239‑1 (MQ=255) cGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGAc < 1:12641/209‑1 (MQ=255) cGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGAGTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGAt < 1:936854/239‑1 (MQ=255) tAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTAGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAAcc < 1:835691/240‑1 (MQ=255) cgacATAATCCTCCCGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACCGCTCACTACGAATACGAAAACGTGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTcc < 2:87558/240‑1 (MQ=255) tctctcAGGTGCAGAAGCTCGGTATCGACAATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATg < 2:91062/240‑1 (MQ=255) tcAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCt < 2:206541/240‑1 (MQ=255) tcAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTGTTTTCCG‑AGGGTGTGGACCACCTTTTCT‑TTGGGTGACAGAGGGACGAGGGGAACCATTCACCGGaggggcc > 2:968289/1‑234 (MQ=255) gCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑aa < 1:1286571/239‑1 (MQ=255) aGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAg‑aga < 1:1252708/238‑1 (MQ=255) cTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGCTTTTTCCG‑CAGGGTTTGACTACCTTCTTT‑TTGCGAGACATCGTTCAGGTGAGAAACTTTCGCCGGATGAGCTCTC‑AAA‑AGAccta > 1:937991/1‑237 (MQ=255) aaCATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTa < 1:264267/190‑1 (MQ=255) aCATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAAc < 1:1310242/240‑1 (MQ=255) aTTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGc < 1:1154108/240‑1 (MQ=255) aTTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGc < 1:1237367/240‑1 (MQ=255) ttCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCg < 1:499712/214‑1 (MQ=255) cTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGa < 1:322707/228‑1 (MQ=255) cTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCtt < 2:188827/240‑1 (MQ=255) aCGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑CTGGGTTTGGCTACCTTCTTT‑TTTGGGTACATCGGTACGATGAGAACCCTCCACCCGATGAGCCCGC‑CAG‑AGACTATCTGGAGCGAACGCTCttttttgtg > 1:1167216/1‑234 (MQ=255) gATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTCGACTACCTTCTTC‑TTGGGGTACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAAAGCTCTTTGTGATggga > 1:44050/1‑238 (MQ=255) tacgaatacgaaAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGATGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCtt < 1:1233348/224‑1 (MQ=255) acgaaAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGaa < 1:382993/227‑1 (MQ=255) gaaAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcac < 1:992922/240‑1 (MQ=255) gaaAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcac < 1:21814/240‑1 (MQ=255) gaaAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcac < 2:624480/240‑1 (MQ=255) aaaCGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcacac < 1:1232640/240‑1 (MQ=255) aaaCGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcacac < 1:619104/240‑1 (MQ=255) aaCGGGCAACGCGTTCACGATTTCAACGATGAAGAGTACGTTCTGACGATGGAGAAATGCGATCGACCGAAGGGAGCGGAGATCAGCTGGGATGATGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCAGCTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCCCCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAAGTCcacacc < 2:22506/240‑2 (MQ=255) ggggAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATg < 1:243073/175‑1 (MQ=255) gggAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑GTGGGTTCGACTACCTTCTTC‑TTTGGGTACATCGGTACGATGAGAAACTTCCACCGGATGAGGTCGC‑CAG‑AGAGTATCTGGAGGGAAAGCTCTTTGTGGTGGGGAGGGGGGAAtctggctctttt > 2:382993/1‑228 (MQ=255) ggAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTcc < 1:1245659/165‑1 (MQ=255) gAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGc < 2:88616/239‑1 (MQ=255) aaCTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCtt < 1:1209706/161‑1 (MQ=255) aaCTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAg < 1:1021610/217‑1 (MQ=255) aCTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGc‑ac < 1:982286/239‑1 (MQ=255) tCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACAcc < 1:841887/240‑1 (MQ=255) gTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTTGCGTACCCTCTTT‑TTTGGGTAAATCGGGACTGGGGAAAACTTCCACCCGATGGGCTCCCAAAG‑AGA‑TCTCTGGTGGGAACGCCCCTTTTGGTGGGAAGGGGGAAAATCtacaaccctcgcccc > 2:162160/1‑226 (MQ=255) gTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTCGACTACCCTCTTC‑TTGGGATACATCGGGACGGTGAGAAACTTCCACCCGGTGAGCTCGC‑AAG‑AGACTATCTGGAGCGGAAGCTCTTTTTGTTGGGAAGGGTGAAAATCACCACACCTGT‑CCACCTg > 2:76709/1‑240 (MQ=255) tCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑GTTGGTTCGACTACCCTCTTC‑TTGGGGGACATCGGGACGATGAGAACCTTTCCCCggagga > 2:1245659/1‑165 (MQ=255) tCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTgg < 1:968289/239‑1 (MQ=255) cACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGAc < 1:952949/240‑1 (MQ=255) aCGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGGTTTTTCCG‑CTGGGTTCGACTACCTTCTTC‑TTGGGGTACATCGGTACGCTGAGAACCTTCCACCCGGTGAGCTCGC‑AAG‑AGACTATCTGGGGCGAACGCCCTTTGTGATGGAAAGGGGGAAAtt > 2:1021610/1‑217 (MQ=255) aaCGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCa < 1:675798/240‑1 (MQ=255) gTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGTGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGTTTTGACTACCCTCTTT‑TTTGGATACATCGGTACGATGAGAACCTTCCACCCGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCCTTTTGATGGAAAGGGGGAAAATCCACACACCTGC‑ACACCCGGACTATTCgggcagg > 1:1060966/1‑235 (MQ=255) gTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTCGACTACCCTCTTC‑TTGGGGTACATCGGTACGAAGAGAACCTTCCACCGGATGAGATCGC‑AAG‑AGACTATCTGGGGCGAAACCCCCTTTTGATGGGAAGGGGGGAAATCCAAACACTTTC‑CCACCCGGACAATCCGGCaaaa > 1:516135/1‑238 (MQ=255) tACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcac < 1:1010144/201‑1 (MQ=255) aCTTTCGCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGaa < 2:1078321/238‑1 (MQ=255) tttCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAg < 1:962381/185‑1 (MQ=255) tttCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGa < 1:1239722/235‑1 (MQ=255) tttCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCa < 1:833225/240‑1 (MQ=255) tctcACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCcacac < 1:899268/198‑1 (MQ=255) tcACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGGTTTGACTACCTTTTTC‑TTGGGGGACATTGGTACGATGGAAACCTTCCCCCCGGTTAGCTCGC‑CAG‑AGAATATCTTGAGCGAACGCTCTTTTTGATGGAAAGGGGGGAATTCCACACACTTGC‑ACACCTGGACTATCCGGCGAGGTAAGCGAAGGCAGaat > 2:895257/1‑238 (MQ=255) cATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGGCTACCCTCTTC‑TTTGGGTAAATCGGTATGGGGAGAAACTTCCTCCGGATGCGCTCGT‑CAG‑AGATTCTCCTGAGTGAAAGCCCTTTGTGATGGGAAGGGCGGAATTTCAACAACTTTC‑AACACTGGAACATCTGGCAAGAGACGCGAAGGGAGAtattac > 2:1113872/1‑235 (MQ=255) aTGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTTGCCTACCTTCTTT‑TTGGGGAACATCGGGAAGATGAGAACCTTCCCCCGGGTGTGATCGC‑AAG‑AGACAATCTGGGGCGAACAGCCTTTGTGATGGGAAGGGGGGAAATTCACCCACTTGCAACACC‑GGACCAATCCGCCAGATAAGCGAAAGGAGAtttttgt > 2:1239722/1‑236 (MQ=255) tGGAGAAATCCGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAg < 1:101754/240‑1 (MQ=255) aaTACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACa < 1:76709/240‑1 (MQ=255) aTACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCCGATGAGCTCGC‑AAG‑AGACTATCTGGGGCGAACGCTCTTTGTGATGGGAAGGGGGGAATTTCACAAAACTTC‑ACACCCGGCCTATCCGGCAAGATAAGCGGAGGCAGATTTCAAAAC‑GAACag > 1:82074/1‑240 (MQ=255) tACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGACAGGCGGTTTTTCCCG‑ATGGTTTCGCCTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACaga < 1:250024/240‑1 (MQ=255) aTCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑GGGGGTTTGACTACCTTCTTC‑TTGGGGTAAATCGGTACGATGAGAAACTTCCACCGGGTGAGCTCGC‑AAG‑AGACTATCTTGAGGGAAAGCTCTTTTTGTTGGGAAGGGGGAAATTTCCCCAACTTGC‑ACACCCGGGATATCCGGCAAAATACGGAAAGGCCAATTTTAAAAA‑GAAAAGAGGtt > 2:988393/1‑240 (MQ=255) ttCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTTCCG‑ATGGGTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGGTGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGGGAAAATCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGAtttta > 1:88920/1‑238 (MQ=255) ttCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGc‑ac < 1:858032/183‑1 (MQ=255) aGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGaa < 1:253360/239‑1 (MQ=255) gAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGaaaa < 1:131959/238‑1 (MQ=255) gCGGAGATCAGCTGGGATGGTCTGGGAGAGGCGGTTTTTCCCG‑ATGATTTCTCCTACCTCCTTC‑TTGGGCTACATCGGTTCGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTCGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACTCCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GACCAGAGATTTGATAGAAAAGAt < 2:578754/239‑1 (MQ=255) ggAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTc < 2:1167216/239‑1 (MQ=255) agaTCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTa < 1:646107/115‑1 (MQ=255) aTCAGCTGGGATGGTGTGGGAGAGGCGGATTTTCCCG‑GTGGGTTTGGCTACCCTTTTT‑TTTGGGTACATCGGTAACAGGAGGACCCTCCACCGGGTTAGCTCCC‑CAGAAGAC‑AACTGGAACGAACGCCCTTTTTGATGGAAAGGGGGGAATTTCACACACCAGC‑ACACCTGGAGTATCCGGCAAGATAGGCGGAGGGAGAATTTAAAGCGGAACGAAGTTTTG‑TAGAAAAAAtttcgggg > 2:465120/1‑234 (MQ=255) tGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATgaga < 1:1209833/71‑1 (MQ=255) ggTGTGGGAGAGTCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGaaa > 1:19095/1‑240 (MQ=255) tgtggggtgtgCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGAAGAGAACCTTCCGCCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGGTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGaaaa < 2:127614/229‑1 (MQ=255) tgGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAAc < 1:616405/239‑1 (MQ=255) gCGGTTTTGCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGc < 2:60578/239‑1 (MQ=255) ggTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGCCCt < 1:1271954/240‑1 (MQ=255) ggTTTTTCCCG‑ATGGTTCCGACTACCTTCTTC‑TTGGGATACATTGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGAATATCCGGCAAGATACGCGAAGGCTGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGCCCt < 2:937991/240‑1 (MQ=255) gTTTTTTCCC‑ATGGTTTTGACTACCTTCTTC‑TTTGGGTACATCGGGAAGATGAGAACCCTCCCCCGGATTAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCCCTTTGTGGTGGCAAGGGGGAAAATCCACACACCTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTTCAAAC‑GAAAAGAGATTTGGTAGAAAAAAATTTGGGGGTCCTCGTGAAAAAAGAAAAGACACtt > 2:861376/1‑240 (MQ=255) ttttCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGCCCTTg < 2:19095/239‑1 (MQ=255) | GATAGACATGCACCTTCACTCCACGTTCTCCTACGATGGAAAGGCGGAAATAGACGACATAATCTCTCAGGTGCAGAAGCTCGGTATCGAACATTTCTGTATCACGGATCACTACGAATACGAAAACGGGGAACTCGTTCACGATTTCAACGTTGAAGAGTACTTTCTCACCATGGAGAAATACGATCTTCCGAAGGGAGCGGAGATCAGCTGGGATGGTGTGGGAGAGGCGGTTTTTCCCG‑ATGGTTTCGACTACCTTCTTC‑TTGGGATACATCGGTACGATGAGAACCTTCCACCGGATGAGCTCGC‑AAG‑AGACTATCTGGAGCGAACGCTCTTTGTGATGGAAAGGGTGAAATTCCACACACTTGC‑ACACCTGGACTATCCGGCAAGATACGCGAAGGCAGATTTCAAAGC‑GAACAGAGATTTGATAGAAAAGATTCTGGTGTTCCTCGTGAAAAACGAAAAGGCCCTTG > NC_021214/825507‑825979 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |