Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_021214 | 26,468 | 0 | C | A | 23.9% | 612.5 / 52.5 | 216 | E32* (GAG→TAG) | TMARI_RS00115 | ABC transporter ATP‑binding protein |
Reads supporting (aligned to +/- strand): ref base C (138/24); new base A (0/51); total (138/78) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.88e-31 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 219 total aligned reads displayed.
GTTCTCTCGACTGGATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTATGAGATTGGG > NC_021214/26230‑26707 | gTTCTCTCGACTGGATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGCGTTAAACGATTTCTTTCTCCTTCACCTCa > 2:712951/1‑240 (MQ=255) tctctcGACTGGATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCaaa > 1:1040252/1‑240 (MQ=255) ctcGACTGGATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGa > 2:1236471/1‑240 (MQ=255) ggATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑t > 1:235460/1‑238 (MQ=255) ggATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑t > 2:594688/1‑238 (MQ=255) gATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑ttct > 1:245642/1‑240 (MQ=255) aTAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑ttct < 1:400152/239‑1 (MQ=255) gtttGAAACGCGAAAAAGGTCCCGGGAAACCCGCGGGGACCTTCCTTCTGAATTCAACC‑AGAGATCCCCTGTCCTTTATATCTTTCCAGATATCTTTCCCTTCAAAG‑T‑AGATTTCACGGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGAAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCCCCTAAAAAGAAACA‑TTCTTCACCGcc < 1:712951/237‑1 (MQ=255) gATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGcc > 1:1012905/1‑239 (MQ=255) aTTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAAGGATTTCTTCCTACTTCACCTCAACAGAAACA‑TTCTTCACCGcc > 1:437043/1‑238 (MQ=255) ttGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCctct > 2:1125045/1‑240 (MQ=255) tAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTATTCACCGCCTCtata > 2:535145/1‑240 (MQ=255) tCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATacga > 1:687936/1‑239 (MQ=255) gCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATacgac > 1:135680/1‑238 (MQ=255) aaaGGATCCGGAAAACCCGCGGGGACCTTCCTTCGAAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCATATATCTTTACCTAAAATG‑T‑AGATTACACCGGAGGGAGGGGAAGGG‑CGCT‑TCAATTTCATCTTGGCGGGGGTTGTTTTCCCGGAACCG‑CTTTCTCCAACGAGAAAAACGATTTCTTTCCCCTTCCCCAAAAAAAAAACA‑TTCTTCACCGCCTCTATACGACGCTTg < 2:83666/240‑1 (MQ=255) gATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGgaga > 1:225276/1‑240 (MQ=255) aTCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGagaa > 1:181172/1‑240 (MQ=255) tCCTGGAAAACCGGGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATTTTTCCAGATATCTTTCCCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTTTTTTTCCGGACCCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTAAAAAAAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGagaag < 1:787060/240‑1 (MQ=255) tCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGagaag > 1:841425/1‑240 (MQ=255) cccTGGAAACCGGCGTGGATCTCCCTTTTGTA‑TCAACCAAGAGTTTCCGTGTCCTTAATTTCTTTCCGGATTTCTTTCCCTTCAAAT‑G‑AGATTGCCCCGGGGGTAGGGGAAAGG‑ATCC‑TAATTATCTTCTTTGCGTGTGTTTTTTTTCCGAACCCC‑TTTTCCCCACCGAGGAAAACGTTTTCTTTCCCTTTCCCCAAAAAAGAAACT‑TTTTTCCCCGCCTCTATACGACGCTTGGagaag < 2:46301/239‑1 (MQ=255) cccTGGAAACCCGCTGGTACCTTCCTTTTAATTTCACCC‑AGAGATCCCCTGTCTTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCCCCGGAGGTGGGGGGAGGG‑ACCC‑TCATTATCATCTTGGCGGTGGTTTTTTTTCCGAACCCG‑TTTTCTCCAACGAGTGAAACGTTTTCTTTCTCCTTCACCTAAAAAAAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGagaag < 2:181172/239‑1 (MQ=255) aaaaCCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCa > 1:707110/1‑240 (MQ=255) gTGGCCCTTCCTTCTGAATTCAACC‑AGAGATCCCCTGTCCTTTATATCTTTCCAGATATCTTTCCCTTCAAAG‑T‑AGATTTCACCGGAGGTGGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTAAAAAGAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTgaga < 1:309217/239‑1 (MQ=255) aCCTTCCTTCTAATTCCAACC‑AGAGTTTCCTTGTCCTTTATATCTTCCCATATTTTTTTACCTTAAAAG‑T‑AGTGTGCCCGGGAGGTGGGGGGAAGG‑CCCC‑TCAGTACCATTTTTGCGGTTGTTGTTTTCCCGGACCCG‑TTTTCCCAAACGAGGGAAACGATTTCTTTCTCCTCCACCTCAAAAAAAACA‑TTCTACACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATc < 2:707110/240‑1 (MQ=255) cttccttcTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTAAAAG‑T‑AGATTTCCCCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCAAACGAGTGAAACGATTTCTTTCTCCTTCCCCTAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCtt < 1:594688/240‑1 (MQ=255) tccttcTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTg > 1:108085/1‑240 (MQ=255) ttcTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTAAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTaa < 1:1023332/240‑1 (MQ=255) ggaatttCCCTGCCTTTTATATTTTCCCGGTTTTTTTTCCCTTCAAAG‑T‑AGTTTCCCCGGGAGGTAGGGGGAAGG‑TCCA‑TCATTTTCTTTTTGGCGGTGGTTGTTTTTCCGGAACGG‑TTTTCCCCAACGTGTGAAACAATTTCTTTCTCCTCCACCAAAAAAAAAACT‑TTCTCCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCacgacg < 2:1155029/235‑1 (MQ=255) agagATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCaaa > 1:43313/1‑161 (MQ=255) agagATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGagaag > 1:881716/1‑216 (MQ=255) agagATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCacgacg > 1:106984/1‑240 (MQ=255) gttCCCCTTCCTTTTTTTTTTTCCAAATTTTTTTTACCTCAAAA‑G‑AGGTTTTCCCGGGGGGAGGGGGAAAG‑GGCCTTCATTATCTTCTTTGCGGTGGTTTTTTTCCCGGAACCG‑TTTTCTCCACGGAGTGAAACTATTTCTTCCCCCTTCCCCAAAAAAAAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCacgacg < 2:236306/236‑1 (MQ=255) ttCCCTGTCCTTTATATCTTCCCAGATATCTTTACCTTCAAAT‑T‑AGTTTTCCCCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTTTTTTTCCGGAACCG‑CTTTCTCCAACGAGTAAAACGATTTCTTTCCCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCt < 1:81301/240‑1 (MQ=255) tCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCt > 1:157924/1‑239 (MQ=255) tCCTTTATTTCTTTCAAGCTTTTTTTCCCTTCAAAG‑T‑TAATTTCCCCGGAGTGGGGGGGAAGG‑ACCC‑CTGTTATCCTCTTTGGGGTTGTTTTTTTTCCGGACCCG‑CTTCCCCCACCGATTGAAACCTTTTTTTCCCCCTTCCCCAAAAAAAAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAATTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATg < 2:148248/240‑1 (MQ=255) ttctatCTTCCCAAGAATCTATACATAAAAAG‑A‑AGATACCACCGG‑GGGAGGGGGAAGGAAACC‑TCATAATCTATTTTGGTGTGGTTTTTTTTCAGCAACCG‑CTTTCACAAACGGTGGAAACTATTTCTTTCCCCTCCCCCAAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGctct < 2:447191/237‑1 (MQ=255) ttATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATacgac > 1:1042991/1‑174 (MQ=255) ttATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGctc > 2:566766/1‑239 (MQ=255) tataTCTTCCCAGATTTCTTTCCCTTCAAAG‑T‑AGATTCCCCGGGAGGGAGGGGAAAGG‑TGCC‑TCAGTATCTTCTTTGCGGTGTTTGTTTTTCCGGACCCG‑TTTTCTCCAACGAGTAAAACTTTTTCTTTCCCCTTCACCTAAAAAGAAACA‑TTCTCCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGctctc < 1:217503/240‑1 (MQ=255) tCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTctcc > 1:76302/1‑239 (MQ=255) tCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTctcc > 1:490209/1‑239 (MQ=255) tCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTctcc > 2:367223/1‑239 (MQ=255) tCTTCCCAGATTTC‑TTCCCCTCAAAG‑TAAGTTTTCACCGGAGGTGGGGGCAAGC‑ACCC‑ACAGTACCACCTTTGCGGTGGTTGTTTTCCGGGACCCG‑CTTCCTCCACCGAGTGAACCAATTCCTTTCTCCTCCACCTAAAAAGAAACA‑TTCTCCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTctcct < 2:65445/240‑1 (MQ=255) tttCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCa < 2:911669/136‑1 (MQ=255) tttCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCtata > 1:972277/1‑163 (MQ=255) tttCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCtcctcc > 1:573357/1‑240 (MQ=255) ttcccAAATATCTTT‑CCCTCAAAGTT‑GGTTTTCCCGGGGGGTGGGGGGAGGG‑ACCC‑TCATTTTCATTTTTGGGGTGTTTGTTTTCCCGGACCCG‑TTTCCCCCAACGAGTGAACCTATTTCTTTCTCCTCCCCCAAAAAAAAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCtcctcc < 2:225276/237‑1 (MQ=255) ttACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGc > 2:269648/1‑240 (MQ=255) cTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGc > 2:1060457/1‑240 (MQ=255) ttCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATc > 2:86956/1‑164 (MQ=255) tCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCa > 1:1053843/1‑239 (MQ=255) cAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCATTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCCCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATc < 1:1007431/176‑1 (MQ=255) cAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATc > 2:1007431/1‑176 (MQ=255) t‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAActct > 2:133452/1‑238 (MQ=255) agtttccccgggAGGTGGGGGAAAGG‑GCCC‑TAATTATCATTTTTGCGGGGGTTTTTTTCCCGAACCCG‑CTTTCTCCAACGGGTAAACCGTTTTTTTTCTCTTCCCCCTAAAAAAAAACT‑TTCTTCCCCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACtcttc < 1:1311280/229‑1 (MQ=255) gATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCa > 1:1108764/1‑185 (MQ=255) cGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTc < 1:367223/240‑1 (MQ=255) gAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCaa > 2:1116345/1‑148 (MQ=255) tAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTAtct > 1:571329/1‑239 (MQ=255) ggggaAAGG‑CGCA‑CCAGTATCATCTTTGCGTTGTTTTTTTTTCCGGACCCG‑TTTTCTCAAAGGAGTGAAACGTTTTCTTCCTCTTTCCCCAAAAAAAAAACT‑TACTCCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTcc < 2:106984/239‑1 (MQ=255) aaGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGc > 1:526013/1‑240 (MQ=255) gCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTCAGCggtgg > 1:338393/1‑240 (MQ=255) cc‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCggtggt > 1:884614/1‑240 (MQ=255) gTATCGTCTTTGCGGTGTTTGTTTTTCCGGACCCT‑CTTTCTCCAACGAGGGAAACGTTTTCTTTCCCCTCCACCTAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGt < 2:1037719/147‑1 (MQ=255) tATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGttctttt > 1:1204730/1‑240 (MQ=255) atcTTGGCGGTGGTTTTTTTTCCGGACCTG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCCCCTAAAAAAAAACT‑TTCTTCCCCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGttctttttctt < 1:1034050/240‑1 (MQ=255) acggggtggtTTTTTCCCCGAAACCC‑TTTTCCCAACCGAGTAAAACGTTTTCTTTCTCCTCCCCCAAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTAc < 2:397012/235‑1 (MQ=255) tGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCGCCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAg > 2:491441/1‑240 (MQ=255) tGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAg > 1:456960/1‑218 (MQ=255) tGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAg > 1:1324516/1‑240 (MQ=255) tggtTTTTTTTCCGGACCCG‑CTTTCCCCAACGAGTGAAACTTTTTCTTTCTCCTTCCCCTAAAAAGAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGAcat < 1:1184793/239‑1 (MQ=255) ttttttCCCGAACCGTTTTTCCCCACCGTTTGAACCTTTTTTTTTCCCCTTC‑CCCCAAAAAAAACATTTCTCCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGAcatccatc < 2:76302/239‑1 (MQ=255) ccGAAACCG‑CTTCCCCCAAGGGGAGAAACCTTTTCTTCCCCCTTCACCAAAAAAGAACCA‑TCCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAg < 2:640715/240‑1 (MQ=255) cGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGttcttc < 1:453419/125‑1 (MQ=255) cGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGAcatcca > 1:651620/1‑230 (MQ=255) aaCCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCa > 1:229446/1‑240 (MQ=255) tccG‑CCTTCTCCAACAAGTGAAACAATTCCTTCCTCCTCCACCCGAACAGAAGCA‑TCTGACGACGCCTCTATTCTGCGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGCCGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCa < 2:1045284/238‑1 (MQ=255) ccG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCa > 1:947255/1‑238 (MQ=255) taaaagacaaaggAGTAAAACCATTTCTTTCTCTTTCCCCAAAAAAGAAACT‑TTCTTCCCCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTa < 2:895689/228‑1 (MQ=255) aCGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGaa > 1:1059267/1‑238 (MQ=255) aCGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGaa > 1:403393/1‑238 (MQ=255) cGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGaa > 1:671542/1‑237 (MQ=255) tgtaaaCGGTTACTTTCTCCTACACCAAAAAAGAAACG‑TGTCACCCCGCCTGTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGGAAGGTTCTTCACAACGTGCCTGCTTCTGCTCGCGCCTCCTGTTGATATCTGCAAGCAGCACTACTTCCTGTGACTATCTCGGTTAGCGGGGTTTCGTTTTCTTTACAGACATCTATCGCGTGAGGGCAGTTTGGATGGATTCTGc < 2:1053843/236‑1 (MQ=255) gTGAAACGATTTCTTTCTCCTTCACCTAAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGc < 1:755519/239‑1 (MQ=255) aaaCGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGcc > 1:634290/1‑240 (MQ=255) aTTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTcttctt > 1:295591/1‑152 (MQ=255) aTTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAAt > 1:895689/1‑227 (MQ=255) tttctttcCCCTTCCCCAAAAAAAAAACT‑TTCTTCCCCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATgg < 1:823728/240‑1 (MQ=255) ttctttctCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCCCGTGAGGGCATCTAGGATGGAATCCGCAGCCAGTTgga > 2:1274753/1‑240 (MQ=255) tttctCCTACCCCTAAAAAAAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCTATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATggagga < 1:1194372/240‑1 (MQ=255) ctcCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGAttt > 1:1285203/1‑240 (MQ=255) ccTTCCCCTAAAAAAAAACT‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTAt < 1:535145/240‑1 (MQ=255) ccTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTAt > 2:281778/1‑240 (MQ=255) ccTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTAt > 1:322518/1‑240 (MQ=255) ccTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTAt > 1:800041/1‑240 (MQ=255) tCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTcttctt > 1:746290/1‑139 (MQ=255) ccTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTATGAGAtt > 1:1148720/1‑240 (MQ=255) cAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGctctc < 1:180298/100‑1 (MQ=255) cAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGctctc > 2:180298/1‑100 (MQ=255) cAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTATGAGATTggg > 2:1186703/1‑240 (MQ=255) | GTTCTCTCGACTGGATAGAAGGGATTGTAACTCGCAAAAGGATCCTGGAAAACCGCGTGGACCTTCCTTCTGAATTCAACC‑AGAGATTCCCTGTCCTTTATATCTTTCCAGATATCTTTACCTTCAAAG‑T‑AGATTTCACCGGAGGTAGGGGGAAGG‑AGCC‑TCAGTATCATCTTTGCGGTGGTTGTTTTTCCGGAACCG‑CTTTCTCCAACGAGTGAAACGATTTCTTTCTCCTTCACCTCAAAAGAAACA‑TTCTTCACCGCCTCTATACGACGCTTGGAGAAGAATCCAAGTGAGAAGATCTTTGTAAGGTTCTTCACGACGAGCCTGCTCATGCTCTCTCCTCCATGTAAAGCCAGCATGCAACTCTTCTTCCTGGTTCTATCTCCGTTAGCGGTGGTTCTTTTTCTTTACAGACATCCATCGCGTGAGGGCATCTAGGATGGAATCTGCAGCCAGATGGAGGATTTATGAGATTGGG > NC_021214/26230‑26707 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |