Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_021214 | 318,288 | 0 | C | T | 64.7% | 102.3 / 122.3 | 118 | F11F (TTC→TTT) | TMARI_RS01535 | peptide ABC transporter substrate‑binding protein |
Reads supporting (aligned to +/- strand): ref base C (1/40); new base T (9/66); total (11/107) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 9.55e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 118 total aligned reads displayed.
ACTTCATTCACTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTATTTACAATGAAGATTT > NC_021214/318050‑318521 | aCTTCATTCACTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCa < 1:469198/240‑1 (MQ=255) ttcattcaCTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTAcc < 1:316315/240‑1 (MQ=255) tcattcaCTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGAGGTGAT‑GGTGACCa > 2:593157/1‑240 (MQ=255) caCTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGTT‑GTTTTTCAttttt > 1:537656/1‑240 (MQ=255) tattatAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGGT‑GGTTACTAtttttttt > 2:1018675/1‑237 (MQ=255) tataACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTgcagca < 2:923507/240‑1 (MQ=255) gTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTTTT‑GTTTGCCATTTTTTTTGCAAGtttt > 2:200769/1‑240 (MQ=255) cccACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTgcgc < 1:887667/240‑1 (MQ=255) aGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTgcgc < 1:703041/229‑1 (MQ=255) aaaCGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGtt < 2:378693/240‑1 (MQ=255) aaaCGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTATTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATg < 1:40627/238‑1 (MQ=255) gTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCa < 1:107910/240‑1 (MQ=255) gCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGTAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAgaga < 2:157419/240‑1 (MQ=255) gTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaac < 1:312964/240‑1 (MQ=255) gTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaac < 1:1153589/240‑1 (MQ=255) aaaTGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaa < 1:332704/240‑1 (MQ=255) aaaTGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaa < 1:202727/240‑1 (MQ=255) aaTGTGATATGAAAAAATGTGGAACGAGTAGTTATTAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATTTTTTCATAGTAATTTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaa < 2:49469/240‑1 (MQ=255) aaTGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaa < 2:1182914/240‑1 (MQ=255) aaTGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaa < 2:466051/240‑1 (MQ=255) aaTGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaa < 1:1122195/240‑1 (MQ=255) aTGTGATATGAAAAAATTATGAACCATTAGTTATTATAATTTCTTTTAAATTT‑AAATTATCCTCTTTTTTGGAATTTTGAAAGAAAATGTTTTCATTATAATTTTATTGATAAACTTTTCTAAAAACCAAACTTTTTTTTAAAGGGGGTG‑TTTTATGAAAAAGTTTCTTTTTGTGGCGGTGCTGGTTAACAATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaa < 1:953645/240‑1 (MQ=255) tgtgATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 2:525229/240‑1 (MQ=255) tgtgATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 1:1218360/240‑1 (MQ=255) tgtgATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 1:601706/240‑1 (MQ=255) tgtgATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 2:548325/240‑1 (MQ=255) tatGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTtat < 1:191210/240‑1 (MQ=255) tGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAg < 2:93299/240‑1 (MQ=255) aaaaTATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑Acc < 1:821266/240‑1 (MQ=255) aaaTATGGAACGATAAGTTATCAT‑ATTTCTTGTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCg < 1:206315/240‑1 (MQ=255) aaTATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCTCAGAGAACAAACAGTTATAGT‑ACCgg < 1:589493/240‑1 (MQ=255) cGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTaaaa < 1:1060440/240‑1 (MQ=255) aGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTTTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑Acc < 1:771227/224‑1 (MQ=255) aGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTgcgc < 1:980482/184‑1 (MQ=255) aGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCa < 2:1245159/240‑1 (MQ=255) aGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCa < 1:691642/240‑1 (MQ=255) ttATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaac < 1:1127826/206‑1 (MQ=255) ttATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCgg < 1:438578/224‑1 (MQ=255) atTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGTT‑GTTTTCCATTTTTTTTGCAAGTTTTTTGTAATTTTTTTTTGTTTTCCGATAACAAAAAATAATATT‑ATCGGGGCCTAAAACAACAAAACCcggc > 2:603954/1‑239 (MQ=255) atTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGga < 2:928340/240‑1 (MQ=255) cTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACt < 2:554970/240‑1 (MQ=255) ttttTATTTGAAATAATCTTCTTTTTTGAGATTTTGAATGAAAATGTTTTCGTAGTAATCTTATGAGTAAGCTGTACTAAAAACAAGACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTGTTTGTGGCGTTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTc < 2:957545/240‑1 (MQ=255) tttAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑a < 1:1035556/240‑1 (MQ=255) tttAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑a < 1:373672/240‑1 (MQ=255) tAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AAc < 1:239000/240‑1 (MQ=255) tttGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTg < 2:1221081/240‑1 (MQ=255) tCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGAt < 2:721271/240‑1 (MQ=255) cTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGaa < 2:138647/240‑1 (MQ=255) tttGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGAt < 1:1005933/240‑1 (MQ=255) gaaAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTTTCATTTTTTTAGCAAGTTTTTTGCCATTTTTTTATGTTTCCCCAGAAAAAACAAATATATT‑ACCGGGGCCTAAAAAAGCAAATCCGGGGGACTTC‑AACGTGAGAGAAGGATGGAAAGAAACA‑CACAagggggg > 1:1174258/1‑237 (MQ=255) gaaAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGAtt < 1:1018675/240‑1 (MQ=255) aaaTGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTca < 1:429485/240‑1 (MQ=255) aTGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCAACATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTcagc < 1:471159/240‑1 (MQ=255) gTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 1:383856/153‑1 (MQ=255) aGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATGTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCt < 2:320394/240‑1 (MQ=255) gTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCCTTTTTTTATCAAAGTTTTTGCCATTTTTTTATGTTTCCCAAGAACAAAAAAATATAGTAACGGGGTCTTAAAAAAGAAAACCCGGG‑GACGTCAAACATG‑TAGCAGGAAGGAAAAAACCACCAAAGGGGGATT‑AACAGGTGTTGcg > 1:146803/1‑238 (MQ=255) tCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAAc < 1:1250806/240‑1 (MQ=255) tCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAAc < 1:979271/240‑1 (MQ=255) tCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAAc < 1:1318406/240‑1 (MQ=255) cTTATGAGTAAGCTTTACTTAAATCAAAATTTTTTTTT‑AAGGTGGTGTTTTTATGAAAAGTTTTCTGTGTGTGGCGGTGCT‑GTTTACGATTTTAGCAGCAAGTTTTGCGTAATTTTTGAATGTTCCCAGAGAACATACAGTTATAGT‑ACCGGGTCCTAAATCATCCAATCCGTGAAACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCCGTTGTTGCTCGAGcc < 2:1226583/240‑1 (MQ=255) cTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAAcc < 1:673387/240‑1 (MQ=255) cTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaa < 1:693589/136‑1 (MQ=255) tATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCAc < 1:502677/240‑1 (MQ=255) tGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTTCT‑GTTCCCCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAAAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCActc < 1:239189/240‑1 (MQ=255) tGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCActc < 1:931056/240‑1 (MQ=255) tGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCActc < 1:1219804/240‑1 (MQ=255) gAGTAAGCTTTACTAAAAACAAAACGTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATc < 1:949794/201‑1 (MQ=255) aGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCca‑c < 1:163883/203‑1 (MQ=255) aGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaaaca < 1:759088/133‑1 (MQ=255) aGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGAt < 1:51263/213‑1 (MQ=255) gTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGTT‑GTTTTTCCTTTTTTTTTCAAGTTTTTTTTTATTTTTGTATGTTTTCCGCAAAAAAAAAACTATAAT‑AACGGGGCCTTAAAAAACAAAAACAGGGGAAACA‑AACGTGGTAGAAGGAGGGAGAAAAACA‑CACACAGGGGGGCAGCAGATGTTGTTCGTAACACCCtgg > 2:502677/1‑240 (MQ=255) aaGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCtgga < 1:1150915/239‑1 (MQ=255) aaGCGTTTCTAAAAACAAAGCTTGCGTTT‑AATGTGTTGTGTTTAAGAAAAGGTTTCTGTTTTTGGCGTTGCT‑GGTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGGTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTGCTAAAACAGCAAAGCCGGGAGGCTTC‑AGCGTGATAGCAGGATGGAAAGATCCG‑CACAGTGGGATTCAGTAGTTGTTGCTCGAAACACTCtgga < 2:48617/239‑1 (MQ=255) cTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCa < 1:35222/154‑1 (MQ=255) ttACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGgatggatg < 1:937580/240‑1 (MQ=255) ttACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGgatggatg < 1:741769/240‑1 (MQ=255) aacaaaacTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCtgtg < 1:603954/240‑1 (MQ=255) aaaacTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgaga < 1:660200/240‑1 (MQ=255) aacTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagagg < 1:1006043/240‑1 (MQ=255) aacTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagagg < 1:155216/240‑1 (MQ=255) cTTTTTTTT‑AAGGGGGTTTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggag < 2:422043/240‑1 (MQ=255) cTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggag < 1:203201/240‑1 (MQ=255) cTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGa < 1:911799/167‑1 (MQ=255) cTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggag < 1:331802/240‑1 (MQ=255) cTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggag < 1:894159/240‑1 (MQ=255) tttttttt‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggag < 1:880314/239‑1 (MQ=255) tttttttt‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggaga < 1:1334668/240‑1 (MQ=255) ttt‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑a < 1:1200347/147‑1 (MQ=255) tgtTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTTACTATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACgcgc < 1:1315953/239‑1 (MQ=255) aaGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTgg < 1:893422/240‑1 (MQ=255) gTTTCTTTTTGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGAt < 1:161144/145‑1 (MQ=255) gTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTgagaggagag < 1:892432/211‑1 (MQ=255) tttttGTGGCGGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGaacaa < 1:293884/71‑1 (MQ=255) tttttGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTAttt < 1:958784/240‑1 (MQ=255) tttttCTTGCGTTGCT‑GTTCACCATTGTTGCAGCAAGTGTTGCGCAATATGTGAATGTTCCCAGGGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAAGCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑GACATGGGGATGCAGCAGTTGTTTCGCGAACCACGCTGGATGGATGATCCTGTGAGAGGAGAGATTTTTAACGCGCTGGCAGAAACTGGCCCTAttt < 2:634451/240‑1 (MQ=255) tttGTGGCTGTGCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTATTTAc < 2:1174258/240‑1 (MQ=255) gCT‑GTTTACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTATTTACAATGAAGAttt < 1:899847/240‑1 (MQ=255) gCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTATTTACAATGAAGAttt < 1:827445/240‑1 (MQ=255) t‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTca < 2:495541/142‑1 (MQ=255) t‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTca > 1:495541/1‑142 (MQ=255) | ACTTCATTCACTATTATAACGTTTCCCACGAACTAAGCAAACGTTTGCGTAAATGTGATATGAAAAAATATGGAACGATAAGTTATCAT‑ATTTCTTTTTAATTTGAAATAATCGTCTTTTTTGAGATTTTGAATGAAAATGTTTTCATAGTAATCTTATGAGTAAGCTTTACTAAAAACAAAACTTTTTTTT‑AAGGGGGTGTTTTTATGAAAAGGTTTCTTTTTGTGGCGGTGCT‑GTTCACCATTTTTGCAGCAAGTTTTGCGCAATTTTTGAATGTTCCCAGAGAACAAACAGTTATAGT‑ACCGGGTCCTAAAACAGCAAATCCGGGAGACTTC‑AACGTGATAGCAGGATGGAAAGATCCA‑CACAGGGGGATTCAGCAGTTGTTGCTCGAACCACTCTGGATGGATGATCCTGTGAGAGGAGAGATTATTAACGCGCTGGCAGAAACTGGCCCTATTTACAATGAAGATTT > NC_021214/318050‑318521 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |