Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,185,4290TG29.3% 239.0 / 40.1 133intergenic (‑128/+95)thiM/rcnRhydroxyethylthiazole kinase/DNA‑binding transcriptional repressor RcnR
Reads supporting (aligned to +/- strand):  ref base T (23/71);  new base G (39/0);  total (62/71)
Fisher's exact test for biased strand distribution p-value = 8.90e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 133 total aligned reads displayed.

TCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGACATCC  >  NC_000913/2185291‑2185563
                                                                                                                                          |                                                                                                                                       
tCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTg                                                                                                                                       >  1:576736/1‑141 (MQ=255)
tCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTg                                                                                                                                       >  2:1778128/1‑141 (MQ=255)
        cATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCgat                                                                                                                               >  1:581085/1‑141 (MQ=255)
                  tCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGc                                                                                                                     <  1:971730/141‑1 (MQ=255)
                  tCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGc                                                                                                                     <  1:971857/141‑1 (MQ=255)
                    cTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCag                                                                                                                   <  2:1508288/141‑1 (MQ=255)
                       ccctAACGTGACGCAGCCATGACCGGGTGGTCCGTGACGTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCACAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAgagg                                                                                                                <  1:1514809/138‑1 (MQ=255)
                       ccATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAgagg                                                                                                                <  1:2377041/141‑1 (MQ=255)
                       ccATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAgagg                                                                                                                <  1:1514832/141‑1 (MQ=255)
                       ccATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAgagg                                                                                                                <  1:1514808/141‑1 (MQ=255)
                          tAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGaggagg                                                                                                             <  1:2558905/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2364834/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2435929/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2435951/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2456653/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2495216/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:1216354/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2495395/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:2624988/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:651195/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  2:911207/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  1:246677/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  1:1162953/141‑1 (MQ=255)
                            aCGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGAt                                                                                                           <  1:117324/141‑1 (MQ=255)
                              gTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATgg                                                                                                         <  1:52782/141‑1 (MQ=255)
                              gTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATgg                                                                                                         <  1:2199511/141‑1 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGGTGCGATGTTAAATCGCAGAGGTGGTTGGTa                                                                                                       >  2:500113/1‑141 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGGGTTGATAAATAGCAGAGGTGGGTTGTa                                                                                                       >  1:726720/1‑141 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGCTTGTAAATCGCAGAGGGGGTGGGTa                                                                                                       >  1:143804/1‑141 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGCTGTTAAAAAGCAGAGGAGGATggga                                                                                                       >  1:143809/1‑139 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGTTAAATCGCAGAGGAGGCTGGtt                                                                                                       >  1:2679883/1‑140 (MQ=255)
                                gaagaaGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAATAGCAGAGGAGGATGGTa                                                                                                       >  2:2080999/1‑141 (MQ=255)
                                     agCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGCTGGTAATGTc                                                                                                  >  2:1555118/1‑141 (MQ=255)
                                     agCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGGTTATAAATAGCAGAGGAGGATGGTAATGTc                                                                                                  >  2:383072/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTCTTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGGTGCGATGGTAAAAAGCCGACGCGGAGGGTAATGTGCAGCGCaa                                                                                          >  2:272577/1‑140 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTTCGGTGATAAATAGCAGATGAGGGTGGTTATTTCCAGCGCAc                                                                                          >  1:659332/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGTTAAATCGCAGAGGTGGATGGTAATGTCCCGCGCAc                                                                                          >  2:669876/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCAc                                                                                          <  2:387139/141‑1 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGGTGATAAATAGCAGAGGAGGGTGGTAATGTGCAGCGCAc                                                                                          >  1:487076/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTACAGCGCAc                                                                                          >  2:669875/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAATAGGAGAGGGGGATGGTAATGTACAGCGCAc                                                                                          >  1:2092275/1‑141 (MQ=255)
                                             ccTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAAAAGCAGAGGAGGATGGTAATGTCCAGCGCAc                                                                                          >  2:796744/1‑141 (MQ=255)
                                               tggtggTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCAcgc                                                                                        <  1:2449647/141‑1 (MQ=255)
                                               tggtggTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCAcgc                                                                                        <  1:527592/141‑1 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATAGCAGAGGAGGATGGTAATGTCCCGCGCAcgcg                                                                                       >  1:1326377/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATTTTAAAAAGCAGAGGAGGATGGTAATGTACAGCGCAcgcg                                                                                       >  1:2502836/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATTAATCGCAGAGGAGGATGGTAATGTGCAGCGCAcgcg                                                                                       >  2:713091/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAAAAGCAGAGGAGGATGGGAATGTGCAGCGCAcgcg                                                                                       >  1:2502828/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGGTTCGAAGATAAATAGCCGAGTAGGATGGTAAATTACACCGCAcgcg                                                                                       >  1:2502775/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGGTGCGATGATAAATCGCAGAGGTGGATGGTAATGTCCCGCGCAcgcg                                                                                       >  1:2653293/1‑141 (MQ=255)
                                                ggtggtCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGGGGTTGCGCTGATAAATCGCAGAGGAGGATGGTAATGTGCAGCGCCcgcg                                                                                       >  2:1378938/1‑141 (MQ=255)
                                                      ccGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTTCGATGATAAAAAGCAGAGGAGGATGGGAATGTCCCGCGCACGCGGTGTaa                                                                                 >  1:2516527/1‑141 (MQ=255)
                                                           aCTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAg                                                                            <  1:2007163/141‑1 (MQ=255)
                                                           aCTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAg                                                                            <  1:2716894/141‑1 (MQ=255)
                                                             ttCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGTTGATAAATCGCTGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAATCGAGG‑a                                                                         <  2:1511890/141‑1 (MQ=255)
                                                             ttCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑a                                                                         <  1:2206183/141‑1 (MQ=255)
                                                             ttCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑a                                                                         <  1:1233810/141‑1 (MQ=255)
                                                             ttCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGATGATAAATCGCCGAGGATGATGGTAATGTCCAGCGCACGCGGTGTAAACGAGG‑a                                                                         >  1:1993533/1‑141 (MQ=255)
                                                              tCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑aa                                                                        <  2:1137296/141‑1 (MQ=255)
                                                                   aCGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACg                                                                   <  1:1714727/141‑1 (MQ=255)
                                                                      cTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGAAGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCa                                                                >  2:597020/1‑141 (MQ=255)
                                                                          cATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGttt                                                            <  1:817340/141‑1 (MQ=255)
                                                                          cATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGttt                                                            <  1:817302/141‑1 (MQ=255)
                                                                                  aGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATcg                                                    <  1:700296/141‑1 (MQ=255)
                                                                                   gATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGTTAAATCGCATATGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAAAGGCAGTTTTACAAAcgc                                                   >  2:1256892/1‑141 (MQ=255)
                                                                                   gATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATcgc                                                   >  2:1295959/1‑141 (MQ=255)
                                                                                   gATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCCATGATAAAACGCAGAGGAGGATGGTAATTTCCCGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTAAAAAcgc                                                   >  2:1256883/1‑141 (MQ=255)
                                                                                   gATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGGGATGTTAAAAAGCAGAGGAGGTTGGTAAATTACAGCGCACGCGGTGTTAAAGAGG‑AAAAAAGGCAGTTTTaaaaaccg                                                   >  1:1392343/1‑137 (MQ=255)
                                                                                   gATCAGCTGATACGGGTATTTCTCAGCCATCACGCAGAAGGGCACCCCCAGTCGTTTGGTTGCGATGATAACTCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGATGTAAACGAGG‑AAAAACGGCAGTTTTACAATcgc                                                   <  2:446302/141‑1 (MQ=255)
                                                                                     tCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGt                                                 <  2:2688125/141‑1 (MQ=255)
                                                                                        ggTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTTCGATGATAAATAGCAGAGGAGGATTGTAATGTCCAGCGCACGCGTTTTAAAAGAGG‑AAAAAAGGCAGTTTTAAAATAGCGGtaa                                              >  2:804936/1‑141 (MQ=255)
                                                                                        ggTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAAAAGCAGAGGAGGATGGTAATGTCCAGCGCCCCCGTTGTAAAAGAGG‑AAAAACGGCAGTTTTACAAACGCGttta                                              >  2:867251/1‑139 (MQ=255)
                                                                                        ggTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATGATAAAAAGCAGAGGAGGCTGGGAAAGTCCCGCGCACGCGTTGTAAAAGAGG‑AAAAAAGGCAGTTTTTAAATCGCGGtaa                                              >  1:603221/1‑141 (MQ=255)
                                                                                          tGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTtaata                                            <  2:1771970/141‑1 (MQ=255)
                                                                                             tACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATTTTAAATCGCAGAGGCGGTTGGTAATTTCCAGCGCACGCGTTGTAAAAGAGG‑AAAAAAGGCAGTTTTACAATAGCGTTAATAAat                                         >  1:636084/1‑141 (MQ=255)
                                                                                             tACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAat                                         <  2:2246886/141‑1 (MQ=255)
                                                                                                  gTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTAttt                                    <  1:1941602/141‑1 (MQ=255)
                                                                                                  gTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATGATAAAAAGCCGATGAGGCTGGTTATGTCCAGCGCACGCGGTGTAAAAGAGG‑AAAAAAGGCAGTTTTACAAAAGCGTTAATAAATTAttt                                    >  1:145451/1‑141 (MQ=255)
                                                                                                   tATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTg                                   <  1:2586515/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  1:1778128/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  2:1392343/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  2:581085/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  1:1589173/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  2:884761/141‑1 (MQ=255)
                                                                                                     tttCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGat                                 <  1:2289807/141‑1 (MQ=255)
                                                                                                       tctcAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCCATGATAAAAAGCCGAGGAGGAAGGTAATGTCCAGCCCACCCGTTGTAAACGAGG‑AAAAACCGCAGTTTTACCATCGCCGTAAAAAAATATTTGatat                               >  2:1204973/1‑141 (MQ=255)
                                                                                                          cAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATg                            <  1:1125826/141‑1 (MQ=255)
                                                                                                          cAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATg                            <  1:41259/141‑1 (MQ=255)
                                                                                                          cAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATTATAAAAAGCAGAGGAGGATGGTAATTTGCACCGCACCCGTTTTAAAAGAGG‑AAAAAAGGCAGTTTTAAAAAAGCGGTAATAAATTATTTTatatatt                            >  1:866629/1‑140 (MQ=255)
                                                                                                          cAGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATGATAAAAAGCACAGGCGGATGGTTATGTCCCCCGCACGCGTTGTAAACGAGG‑AAAAACGGCCGTTTTTCAAGCGCGGTAATAAATTATTTTTTATATg                            >  1:2671881/1‑141 (MQ=255)
                                                                                                           aGCCTTCACGCAGAAGGGCACCCCGAGTCGTGTGGTTTCGATGATAAATCGCCGAGGTGGGTTGTTTTGTGCAGCGCACGCGGTGTTAAAGAGG‑TAAAAAGGCAGTTTTTCAATGGCGTTTATAAATTATTTGttatattt                           >  1:1336305/1‑139 (MQ=255)
                                                                                                                tCACGCAGAAGGGCACCCCGAGTCGTGTGGTTGCGGTGATAAATAGCAGAGGAGGATGGTAATGTCCCGCGCCCGCCGTGTAAACGAGG‑AAAAAACGCAGTTTTTAAAACGCGTTAAAAAAATATTTTATATATTAATACa                      >  1:2270753/1‑141 (MQ=255)
                                                                                                                               ccccGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGa       <  2:2637189/141‑1 (MQ=255)
                                                                                                                               ccccGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGa       <  2:148089/141‑1 (MQ=255)
                                                                                                                               ccccGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGa       <  1:431365/141‑1 (MQ=255)
                                                                                                                                cccGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGAc      <  2:1897042/141‑1 (MQ=255)
                                                                                                                                 ccgtttCGTTTGGGTGGGTTGATTAATCGCATAGGTGGTTGGTAATGTCCAGCGGACGGGTTGTAAACGAGGAAAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGAc      <  2:2310883/136‑1 (MQ=255)
                                                                                                                                 ccGAGTCGGGTGGTTGCGATTATAAAACGCAGAGGAGGATGGTAATGTCCCGCGCACGCGTTGTAAAAGAGG‑AAAAAAGGCAGTTTTACAAAAGCGTTAATAAAATATTTGATATATGAATACAGCACCTTAAGAACGAcc     >  2:342692/1‑140 (MQ=255)
                                                                                                                                  cGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGACAt    <  2:576736/141‑1 (MQ=255)
                                                                                                                                    aGTCGTTTGGCTGCGATGCTAAATCGCAGAGGAGGATGGTAATGTCCAGCGCCCGCGTTGTAACCGAGG‑AAAACCGGCAGTTTTACAATCGCGTTAATAAATTCTTTGATATATGAATCCAGCACCTTCAGAACGACATcc  <  1:2624941/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                       
TCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATGATAAATCGCAGAGGAGGATGGTAATGTCCAGCGCACGCGTTGTAAACGAGG‑AAAAACGGCAGTTTTACAATCGCGTTAATAAATTATTTGATATATGAATCCAGCACCTTCAGAACGACATCC  >  NC_000913/2185291‑2185563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑