| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3589065 = | 97 (0.890) | 8 (0.080) | 6/260 | 3.8 | 5.6% | coding (116/1071 nt) | ugpC | sn‑glycerol 3‑phosphate ABC transporter ATP binding subunit |
| ? | NC_000913 | = 3908232 | 178 (1.770) | coding (135/774 nt) | pstB | phosphate ABC transporter ATP binding subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGCGCGGCCTGGTCGATAGTGAGAAATAAGATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3589211‑3589065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgggccgtcCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGCGT < NC_000913/3908232‑3908097 GTGCGCGGCCTGGTCGATAGTGAGAAATAAGATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGG < 1:1973473/141‑1 TAAGATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCT < 2:1013433/141‑1 ACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTG < 1:1623859/141‑1 CAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGT > 1:917885/1‑141 CAGGTCATTAAACCGCTGACCCTTGATGAGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAAAGGTTGAACTGTACCCGGAGCAGCGTGCGGAAGGT > 1:917488/1‑141 ACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGC < 2:1310760/141‑1 GTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATC > 1:462445/1‑141 ATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGAT < 1:1410839/141‑1 ATCGTGATGGTCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGAT < 1:235924/141‑1 TCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGC < 2:724074/141‑1 CGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCT > 2:1848600/1‑141 GGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACACAAGGTTTGAACTGGACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTG < 1:1795143/141‑1 GGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTG > 2:1246445/1‑141 GGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTG < 1:1795112/141‑1 GGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGC > 2:1234211/1‑141 GGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGC > 2:1411035/1‑141 GGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGC > 2:1730007/1‑141 GGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGC > 1:1468489/1‑141 CCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGCGT > 2:442060/1‑141 GTGCGCGGCCTGGTCGATAGTGAGAAATAAGATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3589211‑3589065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgggccgtcCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGCGT < NC_000913/3908232‑3908097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |