BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3428664	152 (1.400)	58 (0.710) +ACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC	14/210	1.5	33.8%	noncoding (99/1542 nt)	rrsD	16S ribosomal RNA
*	?	NC_000913	= 4035603	NA (NA)	58 (0.710) +ACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC	14/210	1.5	33.8%	noncoding (73/1542 nt)	rrsA	16S ribosomal RNA

Only 100 of 216 total aligned reads displayed.

ATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAA  >  NC_000913/3428524‑3428800

aTCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCg                                                                                                                                          >  1:759627/1‑141 (MQ=32)

aTCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCg                                                                                                                                          >  1:1305117/1‑141 (MQ=32)

  cTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTc                                                                                                                                        >  1:679275/1‑141 (MQ=32)

   tGGGCACATCCGATGGCACGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTCTCCCCCTCCATCC‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  2:779091/141‑1 (MQ=12)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1067352/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:373230/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:498744/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1821901/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1539348/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1514518/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1499123/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  2:365869/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1158803/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  2:610517/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                                       <  1:1327324/141‑1 (MQ=32)

       cacaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGa                                                                                                                                   <  1:1773359/141‑1 (MQ=33)

       cacaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGa                                                                                                                                   <  2:1287096/141‑1 (MQ=33)

        acaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaa                                                                                                                                  <  1:1097351/141‑1 (MQ=34)

        acaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaa                                                                                                                                  <  1:672750/141‑1 (MQ=34)

         caTCCGCTGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCCTCC‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1259878/141‑1 (MQ=255)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1308329/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:793587/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  1:664163/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:764908/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1107522/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:697298/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1117568/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:54249/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:505948/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1349176/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1392154/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1670347/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:167944/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1745217/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1889186/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:1975280/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  2:408999/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  1:1464444/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  1:1361415/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                                 <  1:1346623/141‑1 (MQ=34)

            ccGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAg                                                                                                                              <  1:1112175/141‑1 (MQ=33)

              gctGGCAAGAGGCCCGAGGGACCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGTAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:77551/139‑1 (MQ=12)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  2:745345/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:878583/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:143510/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            >  1:719054/1‑141 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1454805/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1238471/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1901692/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1963177/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  2:761918/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1138463/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:1471297/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:23173/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:420270/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:41497/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  2:1665312/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGGTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  1:562321/141‑1 (MQ=17)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACAGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                                            <  2:1382647/141‑1 (MQ=17)

               aTGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCaa                                                                                                                           <  2:1484429/141‑1 (MQ=32)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                                          <  1:713248/141‑1 (MQ=32)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                                          <  1:819408/141‑1 (MQ=32)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCCGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCCCTCGTCAGCGAAACAGCAAGCTg                                                                                                                       >  2:1531775/1‑141 (MQ=17)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccg                                                                                                                       >  2:1839903‑M1/1‑122 (MQ=255)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg                                                                                                                       >  2:283190/1‑141 (MQ=32)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg                                                                                                                       >  2:1530641/1‑141 (MQ=32)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGAAATTACTCACCCGTCCGCAACTCGTCAGCGAAACAGCAAGCTg                                                                                                                       >  2:1174318/1‑141 (MQ=17)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACAGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCACAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACATCAAGCTg                                                                                                                       >  2:1617455/1‑141 (MQ=12)

                        ggCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTcc                                                                                                                  <  1:175416/141‑1 (MQ=32)

                                          tttGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccg                                                                                                >  2:1399512‑M1/1‑99 (MQ=255)

                                          tttGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccg                                                                                                >  2:1613665‑M1/1‑99 (MQ=255)

                                          tttGGTCTTGCGACGTTATGCGGTATTAGCCATCGTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccg                                                                                                >  2:1482331‑M1/1‑99 (MQ=255)

                                                                 taatAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCAGCCACTCGTCAGCGAAACAGCAAGCGGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCg                                                                         >  2:1030368/4‑141 (MQ=0)

                                                                        tACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgcca                                                                  <  1:1637596‑M1/141‑73 (MQ=255)

                                                                        catcgttTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgcca                                                                  <  1:1604826‑M1/138‑73 (MQ=255)

                                                                          tcgTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                                                >  1:928217‑M1/2‑67 (MQ=255)

                                                                          tcgTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                                                <  2:155916‑M1/140‑75 (MQ=255)

                                                                          ccGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                                                <  1:140543‑M1/141‑75 (MQ=255)

                                                                          ccGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                                                <  1:587053‑M1/141‑75 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                                            >  1:1014307‑M1/1‑63 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                                            >  1:237866‑M1/1‑63 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                                            >  1:616011‑M1/1‑63 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                                            >  1:907989‑M1/1‑63 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                                            >  1:189925‑M1/1‑63 (MQ=255)

                                                                                    tggttaTCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctg                                                      <  1:336526‑M1/139‑85 (MQ=255)

                                                                                    tggttaTCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctg                                                      <  1:1161619‑M1/139‑85 (MQ=255)

                                                                                        tATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagcc                                                  <  1:692722‑M1/141‑89 (MQ=255)

                                                                                        tATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagcc                                                  <  1:694317‑M1/141‑89 (MQ=255)

                                                                                        tATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagcc                                                  <  1:1849889‑M1/141‑89 (MQ=255)

                                                                                              cccacatcagGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgat                                             <  1:990578‑M1/137‑94 (MQ=255)

                                                                                                 acaTCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaa                                          <  1:204207‑M1/140‑97 (MQ=255)

                                                                                                     cA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                                     <  1:766513‑M1/141‑102 (MQ=255)

                                                                                                     cA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                                     <  1:1418802‑M1/141‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                                     <  1:1185580‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                                     <  1:1216680‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                                     <  1:852321‑M1/139‑102 (MQ=255)

                                                                                                           agattCCTAGGCATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGttt                                >  1:1617610/4‑141 (MQ=0)

                                                                                                            atttcCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatt                               >  1:6508‑M1/2‑34 (MQ=255)

                                                                                                                 ctaggcATTACTCACCCGTCCACCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCt                          >  1:1287067/6‑141 (MQ=0)

                                                                                                                                         gctCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatttaaaagtttgacgctcaaagaattaaact  >  1:705834‑M1/2‑5 (MQ=255)

ATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAA  >  NC_000913/3428524‑3428800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.