BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2304959	54 (0.500)	7 (0.080)	5/238	3.9	9.2%	intergenic (+566/+149)	eco/mqo	serine protease inhibitor ecotin/malate:quinone oxidoreductase
*	?	NC_000913	= 4325900	93 (1.010)	7 (0.080)	5/238	3.9	9.2%	intergenic (‑159/+499)	yjdN/yjdM	PF06983 family protein YjdN/zinc ribbon domain‑containing protein YjdM
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

GAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA  >  NC_000913/4325760‑4326038

gagaAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt                                                                                                                                             >  1:1407398/1‑141 (MQ=255)

   aaGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt                                                                                                                                          <  1:182397/141‑1 (MQ=255)

   aaGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt                                                                                                                                          >  1:603421/1‑141 (MQ=255)

        aGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc                                                                                                                                     <  1:1000782/141‑1 (MQ=255)

                 tAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAc                                                                                                                            <  1:1901022/141‑1 (MQ=255)

                 tAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAc                                                                                                                            <  1:513566/141‑1 (MQ=255)

                   gTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgc                                                                                                                          >  1:1812533/1‑141 (MQ=255)

                     tCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc                                                                                                                        >  1:1582146/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTTCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg                                                                                                                     >  1:1480727/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCCGGCCTTCGGAGGGTGCGGGACTTTGTAGGCCTGATAAGACGCGCAAg                                                                                                                     >  2:1823893/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCCAg                                                                                                                     >  1:166607/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCCAg                                                                                                                     >  1:166695/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg                                                                                                                     >  1:688901/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg                                                                                                                     >  2:1066755/1‑141 (MQ=255)

                        aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg                                                                                                                     >  1:1497889/1‑141 (MQ=255)

                                  aGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                                           <  1:1131465/141‑1 (MQ=255)

                                  aGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                                           <  2:1314817/141‑1 (MQ=255)

                                  aGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                                           <  1:161556/141‑1 (MQ=255)

                                    aTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                                                         <  1:1581606/141‑1 (MQ=21)

                                         agGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTc                                                                                                    <  2:1655476/141‑1 (MQ=38)

                                          ggcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCg                                                                                                   <  1:1779322/141‑1 (MQ=37)

                                          ggcggcCGGATCAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGGTGCCGGATGCGGCGTACACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCg                                                                                                   <  2:1057729/141‑1 (MQ=255)

                                           gcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCgg                                                                                                  <  2:948715/141‑1 (MQ=35)

                                             ggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCa                                                                                                >  1:1975884/1‑141 (MQ=34)

                                                    tAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑GTTGc                                                                                        >  2:1733882/1‑141 (MQ=17)

                                                           cgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgc                                                                                 <  1:1449785/141‑1 (MQ=37)

                                                           cgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgc                                                                                 <  1:1449906/141‑1 (MQ=37)

                                                           cgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgc                                                                                 <  1:1667665/141‑1 (MQ=37)

                                                            gcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgcg                                                                                >  1:644940/1‑141 (MQ=37)

                                                            gcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgcg                                                                                <  1:1493062/141‑1 (MQ=37)

                                                            gcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgcg                                                                                <  1:1493171/141‑1 (MQ=37)

                                                             cgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATgcgg                                                                               <  1:132752/141‑1 (MQ=35)

                                                                  gTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑ACGGC‑‑‑‑‑‑TGTCGGATGCGGCGTAAACGCCt                                                                    >  1:1450451/1‑141 (MQ=11)

                                                                   tCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaaa                                                                         <  1:1874747/141‑1 (MQ=34)

                                                                   tCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaaa                                                                         <  1:460031/141‑1 (MQ=34)

                                                                   tCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaaa                                                                         <  1:540013/141‑1 (MQ=34)

                                                                   tCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaaa                                                                         <  1:540263/141‑1 (MQ=34)

                                                                              aGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCg                                                              <  2:919173/141‑1 (MQ=34)

                                                                              aGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCg                                                              <  2:920818/141‑1 (MQ=34)

                                                                               gTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCa                                                                                                                       <  2:244838/84‑1 (MQ=33)

                                                                               gTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCa                                                                                                                       >  1:244838/1‑84 (MQ=33)

                                                                               gTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                             >  2:1801467/1‑141 (MQ=34)

                                                                               gTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                             >  1:870189/1‑141 (MQ=34)

                                                                                tCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                            >  1:699468/1‑141 (MQ=33)

                                                                                     accgTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTTATAAGACGCGCCAGAGTCGCATCAGCCATCAAGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCAAc                                                        >  1:570874/4‑141 (MQ=1)

                                                                                     accgTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACg                                                       >  1:1036296/4‑141 (MQ=17)

                                                                                     accgTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCATGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                        >  1:571401/4‑141 (MQ=11)

                                                                                     aCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAca                                                       >  1:1676689/1‑140 (MQ=17)

                                                                                     aCTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAca                                                       >  1:1676654/1‑140 (MQ=17)

                                                                                        gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                                                    <  2:733166/141‑1 (MQ=32)

                                                                                        gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                                                    >  2:1920826/1‑141 (MQ=32)

                                                                                             cGGCTGCGGCGTAAACGCCTTCTCCGGCCTACGGAGGGTGCGGGAATTTGTCGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGc                                               <  1:178157/141‑1 (MQ=12)

                                                                                             cGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGc                                               <  1:817718/141‑1 (MQ=32)

                                                                                             cGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGc                                               <  1:817797/141‑1 (MQ=32)

                                                                                               gATGCGGCGTAAACGCCTTATCCGGCCTACGGTGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg                                             >  2:1901296/1‑141 (MQ=17)

                                                                                               gATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaa                                                                          <  1:1900024/112‑1 (MQ=32)

                                                                                               gATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTaa                                                                          >  2:1900024/1‑112 (MQ=32)

                                                                                                aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:734072/141‑1 (MQ=32)

                                                                                                aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:1709925/141‑1 (MQ=32)

                                                                                                aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:1750771/141‑1 (MQ=32)

                                                                                                aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:735229/141‑1 (MQ=32)

                                                                                                aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCAAC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:1277210/141‑1 (MQ=17)

                                                                                                 tGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                                           <  1:1216816/141‑1 (MQ=32)

                                                                                                  gcggcgTTCTCGCTTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGTCGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  2:864388/141‑1 (MQ=11)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTTCGGAGTGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  2:1812176/141‑1 (MQ=17)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  1:10105/141‑1 (MQ=32)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  1:1136581/141‑1 (MQ=32)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  2:1231338/141‑1 (MQ=32)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  2:1975884/141‑1 (MQ=32)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  1:810642/141‑1 (MQ=32)

                                                                                                  gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                                          <  1:9672/141‑1 (MQ=32)

                                                                                                   cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt                                         <  2:4212/141‑1 (MQ=32)

                                                                                                   cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt                                         <  2:4188/141‑1 (MQ=32)

                                                                                                         aaaCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg                                   >  2:1772532/1‑141 (MQ=32)

                                                                                                         aaaCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg                                   <  2:1329527/141‑1 (MQ=32)

                                                                                                                    ccGGCCTTCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                        <  2:1570676/141‑1 (MQ=17)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATTAGACGCGCAAGCGTCGCATCTGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCGTTATCCGGCCTACGGAGGGGGGGGGCGTGTGGAGGGCTGaggcggcg                      >  2:512574/1‑134 (MQ=11)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            <  1:1950202/119‑1 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                                            >  2:1950202/1‑119 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                      >  2:1732430/1‑141 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                      >  1:427192/1‑141 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                      >  2:1747759/1‑141 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                      >  2:1011755/1‑141 (MQ=32)

                                                                                                                      ggCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                      >  2:1011768/1‑141 (MQ=32)

                                                                                                                         cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc                   <  1:1111797/141‑1 (MQ=32)

                                                                                                                              gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCAT‑AGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  1:227539/141‑1 (MQ=17)

                                                                                                                               aGGGTGCGGGACTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  2:12461/141‑1 (MQ=17)

                                                                                                                               aGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  1:902423/141‑1 (MQ=32)

                                                                                                                               aGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  1:902665/141‑1 (MQ=32)

                                                                                                                               aGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  2:10544/141‑1 (MQ=32)

                                                                                                                               aGGGTGCGGGAAATTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt             <  2:12441/141‑1 (MQ=17)

                                                                                                                                gggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc            >  1:994472/1‑141 (MQ=32)

                                                                                                                                 ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGTTAATACGCGCAAGCGTCg           >  2:1418803/1‑141 (MQ=17)

                                                                                                                                 ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg           >  2:1416176/1‑141 (MQ=32)

                                                                                                                                 ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg           >  2:1758140/1‑141 (MQ=32)

                                                                                                                                     cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATc       <  1:1747759/141‑1 (MQ=32)

                                                                                                                                       ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAg     >  2:1117650/1‑141 (MQ=32)

                                                                                                                                          aTTTGTCGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACA‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa  <  2:1883633/141‑1 (MQ=17)

                                                                                                                                          aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa  <  2:1883637/141‑1 (MQ=32)

                                                                                                                                          aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCATTATCCGGCCAACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa  <  2:386888/141‑1 (MQ=17)

GAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACC‑ATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA  >  NC_000913/4325760‑4326038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.