BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3428664	196 (1.370)	59 (0.550) +ACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC	20/210	1.6	28.7%	noncoding (99/1542 nt)	rrsD	16S ribosomal RNA
*	?	NC_000913	= 4035603	NA (NA)	59 (0.550) +ACGCCGTTAACGTCCCCCGAAGGTTCAGTTAACTC	20/210	1.6	28.7%	noncoding (73/1542 nt)	rrsA	16S ribosomal RNA

Only 100 of 265 total aligned reads displayed.

ATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAA  >  NC_000913/3428524‑3428783

aTCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCg                                                                                                                         >  1:2446316/1‑141 (MQ=32)

 tCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGGTAGGCGGTATTAGCTACCGTTTCCTGTAGTTATACCCCTCCTTCC‑GGCAGTTGCCCAGACATGACTCACCCGTCCGCCCCTCGt                                                                                                                        >  2:656899/1‑141 (MQ=11)

  cTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTc                                                                                                                       <  1:473439/141‑1 (MQ=32)

  cTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTc                                                                                                                       <  1:2466608/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1087596/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  2:2390367/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  2:230734/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  2:1250378/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:9237/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:660874/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:2343306/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1866703/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1722158/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1273330/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1192953/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1310951/141‑1 (MQ=32)

   tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCa                                                                                                                      <  1:1335778/141‑1 (MQ=32)

    gggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAg                                                                                                                     >  1:1217407/1‑141 (MQ=32)

       cacaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGa                                                                                                                  <  1:409295/141‑1 (MQ=33)

       cacaTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGa                                                                                                                  <  1:1168619/141‑1 (MQ=33)

         caTCCGATGGCACGAGGCCCGAGGGTCCCCCACTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCC‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1867536/141‑1 (MQ=255)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCCTCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:489559/141‑1 (MQ=21)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaag                                                                                                                <  2:1349927/141‑2 (MQ=18)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:444516/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1376303/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:882687/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1473859/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1486443/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:827752/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1739993/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:769313/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1810347/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:2082751/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:469885/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:1058433/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:2190510/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:729072/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:373217/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:530051/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:2448596/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:174791/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:2469870/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  1:1380254/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:2488322/141‑1 (MQ=34)

         caTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGGTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                >  1:1491421/1‑141 (MQ=21)

         agtCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaaa                                                                                                                <  2:923360/139‑1 (MQ=21)

          aTCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAAc                                                                                                               <  1:634820/141‑1 (MQ=34)

           tCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACACCACAGCGAAACa                                                                                                              >  1:585227/1‑141 (MQ=255)

             cGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGc                                                                                                            <  2:2508664/141‑1 (MQ=32)

              gctGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCCTCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:1032550/139‑1 (MQ=17)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAgcagca                                                                                                           >  2:472960/1‑141 (MQ=17)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:1284150/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:1899846/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:1800799/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:1128047/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:2118707/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:328307/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:412713/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:2549266/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:1555178/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:1604856/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:1857009/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:289464/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:516797/141‑1 (MQ=32)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGGTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:349308/141‑1 (MQ=17)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTAGTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  1:383311/141‑1 (MQ=17)

              gATGGCAAGAGGCCCGAGGGTCCCCCTCTGTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           >  2:1603423/1‑141 (MQ=17)

              gATGGCAACACGCCCCAGGGTCCCCCACTTAGCTCAAGCGACGTTAAGCGCTAATAGCTACCGCTTCCAGTAGTTATCCCCCACCAACA‑GGCAGTTTCCCACACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCa                                                                                                           <  2:2573782/141‑1 (MQ=11)

               aTGGCAAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcc                                                                                                          >  2:679040‑M1/1‑126 (MQ=255)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCCTCA‑GGCAGTTTCCCAGACATTCCTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                         <  2:1237585/141‑1 (MQ=17)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                         <  1:71610/141‑1 (MQ=32)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                         <  1:1619696/141‑1 (MQ=32)

                tGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAg                                                                                                         <  2:2164003/141‑1 (MQ=32)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg                                                                                                      >  2:166753/1‑141 (MQ=32)

                   cAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg                                                                                                      >  1:988415/1‑141 (MQ=32)

                                          tttGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccg                                                                               >  2:1100177‑M1/1‑99 (MQ=255)

                                          tttGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccacgaaggttcagttaactcgtttccg                                                                               >  2:810218‑M1/1‑99 (MQ=255)

                                                       cGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatg                                                                  >  1:990472‑M1/1‑86 (MQ=255)

                                                                        tACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgcca                                                 <  1:861600‑M1/141‑73 (MQ=255)

                                                                        catcgttTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgcca                                                 <  1:2288433‑M1/138‑73 (MQ=255)

                                                                        catcgttTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgcca                                                 <  2:2220121‑M1/138‑73 (MQ=255)

                                                                          tcgTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                               <  1:878981‑M1/140‑75 (MQ=255)

                                                                          tcgTTTCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagc                                               <  1:1295677‑M1/140‑75 (MQ=255)

                                                                              ttCCAATGGTTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttc                                           >  1:1003296‑M1/1‑63 (MQ=255)

                                                                                ccAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaa                                         >  2:565991‑M1/1‑61 (MQ=255)

                                                                                     ggttATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctga                                    <  1:1398212‑M1/140‑86 (MQ=255)

                                                                                      gtTATCCCCC‑ACATCAGGGCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgag                                   >  1:2416327‑M1/1‑55 (MQ=255)

                                                                                           tcccccacatcagggCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccat                               <  2:1925433‑M1/134‑91 (MQ=255)

                                                                                                     cA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:2113154‑M1/141‑102 (MQ=255)

                                                                                                     cA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:1276965‑M1/141‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:2061751‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgtcgccagcgttcaatctgagccatgatcaaactct                    <  1:1421504‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:2073485‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:61238‑M1/139‑102 (MQ=255)

                                                                                                      agggcaATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactct                    <  1:295362‑M1/139‑102 (MQ=255)

                                                                                                        ggCAATTTCCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttc                  <  2:644766‑M1/141‑104 (MQ=255)

                                                                                                            atttcCTAGGCATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatt              >  1:816388‑M1/2‑34 (MQ=255)

                                                                                                                cctaggcattactCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatttaag          <  1:2510617‑M1/135‑112 (MQ=255)

                                                                                                                      cATTACTCACCCGTCCGCCGCTCGacgccgttaacgtcccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatttaagattttg    >  2:2360214‑M1/1‑24 (MQ=255)

                                                                                                                        ttACTCACCCGTCCGCCGCTCGacgccgttaacgttccccgaaggttcagttaactcgtttccgctcgacttgcatgtgttaggcctgccgccagcgttcaatctgagccatgatcaaactcttcaatttaagattttgtc  >  1:1780405‑M1/1‑22 (MQ=255)

ATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCA‑GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAGCCATGATCAAACTCTTCAATTTAAAAGTTTGATGCTCAAAGAA  >  NC_000913/3428524‑3428783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.