| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,244,613 | 0 | G | T | 26.6% | 161.5 / 12.5 | 94 | Q155K (CAA→AAA) | malF | maltose ABC transporter membrane subunit MalF |
| Reads supporting (aligned to +/- strand): ref base G (42/27); new base T (25/0); total (67/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.59e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCATCATCACTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTAA > NC_000913/4244481‑4244748 | tcatcatcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTagccgc > 1:909656/1‑141 (MQ=255) catcatcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTGGGGTGGAGTGTTTGCTCgccgcc > 2:2165134/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTCAGTTGCAGTTTTTGCTCGCCGCCaaa > 2:212401/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTGAGTTGCAGTTTTTTCTCGCCGCCaaa > 1:65607/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCATTTGCAGTTTTTGCTAGCCGCCaaa > 2:623754/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTTCAGTTTTTGCTCGCCGCCaaa > 1:615343/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTCTCGCCGCCaaa > 1:619514/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTCTCGCCGCCaaa > 1:619488/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTAAGTTGCAGTTTTTTCTCGCCGCCaaa > 1:65630/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTATTTAAGTTGCAGTTTTTTGTCGCCGCCaaa > 1:864626/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTAATTAAGTTTCAGTTTTTTGTAGCCGCCaaa > 1:1862380/1‑141 (MQ=255) catcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTCAGTTGCAGTTTTTGCTCGCCGCCaaa > 1:616221/1‑141 (MQ=255) tcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTCTCGCCGCCaaaat > 1:1597762/1‑139 (MQ=255) tcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTATCGCCGCCAAAtt > 1:885605/1‑141 (MQ=255) tcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTGTTTCAGTTGCAGTTTTTTGTAGCCGCCaaaat > 1:880649/1‑139 (MQ=255) tcaCTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTCAGTTTCAGTTTTTTCTCGCCGCCCAAtt > 1:512926/1‑141 (MQ=255) tttGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTaaa < 1:349253/141‑1 (MQ=255) ttgttgCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTGAGTTTGAGTTTTTGCTCGCCGCCAAATTTaaaa > 2:2125448/1‑141 (MQ=255) ttgttgCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGGAGTTTTTGCTCGCCGCCAAATTTtaaa > 2:2009322/1‑141 (MQ=255) ttgttgCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTaaaa > 2:2125315/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCATCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTATTTAAGTTTCAGTTTTTTCTAGCCCCCCAAATTAAAAACGTAggt > 1:1620128/1‑140 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTCAGTTGCAGTTTTTTCTCGCCGCCAAATTTAAAAGCGTCGga > 1:2074815/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTAAGTTGCAGTTTTTTCTCGCCGCCAAAATTAAAAGCGTCggg > 1:1965403/1‑140 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 2:205340/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 2:1824543/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 2:1824508/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 2:1588376/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGGTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 1:2512233/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTGTTTGAGTTGGAGTTTTTTGTCGCCGCCAAATTTAAAAGCGTCGga > 1:14653/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTGAGTTGCAGTTTTTGGTCGCCGCCCAATTTAAAAGCGTCGga > 1:14392/1‑141 (MQ=255) aTCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGga > 2:1494556/1‑141 (MQ=255) ccGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGgaga > 1:764281/1‑141 (MQ=255) aGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTaa < 2:2149007/141‑1 (MQ=255) gAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAAt > 1:1517717/1‑141 (MQ=255) gAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTCAGTTGCAGTTTTTGCTCGCCGCCCAATTTAAAAGCGTCGGAGAGGTAAt > 1:1549489/1‑141 (MQ=255) ggTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGcc > 1:1129090/1‑141 (MQ=255) aaTGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTAAGGTGCAGTTTTTTCTCGCCGCCAAAATTAAAATCGTCGGAGAGGTAATTTTTGCCGGt > 1:481324/1‑141 (MQ=255) cACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGc < 2:305744/141‑1 (MQ=255) cACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGc < 2:304693/141‑1 (MQ=255) cTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTGAGTTGGAGTTTTTTCTCGCCGCCCAATTTAAAATCGTCGGGGAGGTAATTTTTGGCGGTTTCGCCg > 1:231427/1‑141 (MQ=255) cTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCg > 2:1232183/1‑141 (MQ=255) cTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTATGCCGGTTTCGCCg > 2:1323070/1‑141 (MQ=255) tCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGt > 2:2323919/1‑141 (MQ=255) cAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTAAGTTGCAGTTTTTTCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTTGCGGTTTCGCCggc > 1:74369/1‑139 (MQ=255) gcgcCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTGAGTTGCAGTTTTTGGTCGCCGCCCAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTAGCCGTCGc > 1:275813/1‑141 (MQ=255) gcgcCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTAAGTTGCAGTTTTTTGTCGCCGCCAAAATTAAAATCGTAGGAGAGGTAATTTTTTGCGGTTTAGCCGTCGc > 1:807212/1‑141 (MQ=255) gcgcCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTCTAGCCGCCAAATTTAAAAGCGTCGGAGTGGTAAATTTTGGCGGTTTCGCCGTCGc > 1:1451983/1‑141 (MQ=255) gACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTCTTTAAGTTTGAGTTTTTTGTAGCCGCCCAATTTAAAAGCGTCGGAGAGGGAATTTTTTACGGTTTGGCCGTCGCGGAgcg > 1:30686/1‑141 (MQ=255) aCGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAgcgc < 1:1475266/141‑1 (MQ=255) aCGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAgcgc < 1:1067767/141‑1 (MQ=255) cGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGcc < 1:1792359/141‑1 (MQ=255) gATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCa < 1:2071513/141‑1 (MQ=255) aTTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAg > 2:2363420/1‑141 (MQ=255) cTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTAGCTGAGCGCCAGTTg > 2:2147362/1‑141 (MQ=255) gggTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTTCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTTCCGGTTTCGCCGTCGCTGAGCGCCAGTTGcc > 2:120221/1‑141 (MQ=255) gggTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTTCCGGTTTCGCCGTCGCTGAGCGCCACTTGcc > 2:1016199/1‑141 (MQ=255) gggTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGcc < 1:1158950/141‑1 (MQ=255) gTAATCTCGCTCAGCTTCGTGCGTTTTCCTTCGGGCTGGTCTGTCGTTTGTTTCAGTTGCAGTTTTTGCTCGCCGCATATTTTAAATGCGTCGGTGAGGTTCTTTTTGGCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCAc < 2:1548710/141‑1 (MQ=255) gTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCAc < 2:1548724/141‑1 (MQ=255) aTCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCGTTAAGTTTGAGTTTTTTGTCGCCGCCCAATTTAAAATCGTCGGAGAGGTAATTTTTGCCGGTTTAGCCGGCGCAGGGCGCCCCTTGCcacaca > 1:1952940/1‑141 (MQ=255) aTCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTGTTTAAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCCTCGCTGGGCGCCAGTTGCcacaca > 1:2472699/1‑141 (MQ=255) gcgcAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTGAGTTGCAGTTTTTTCTCGCCGCCAAAATTAAAATCGTCGGAGATGTAAATTTTTCCGGTTTAGCCGTCGCTGAGCGCCAGGTGCcacacaaagcc > 1:78454/1‑136 (MQ=255) gcgcAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTGTTTTTGAGTTTGAGTTTTTTCTAGCCGCCCAAATTAAAAGCGTCGGAGAGGTAAATTTTTGCGGGTTAGCCGGCGCTGAGCGCCAGTTTCcacacaaagcc > 1:78459/1‑136 (MQ=255) aGATTCGCTCCTACGCCTTCGGGCGTGGCTGTCCTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATcgcccgcc < 1:1542878/141‑1 (MQ=255) aGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATcgcccgcc < 1:205340/141‑1 (MQ=255) cgTTCGCCTTCGGGCTGGGCGGTCGTTTGTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTGCCGGTTTAGCCGTCGCTGAGCGCCAGTTGCCCCTCAACGCCCGCCGGGGAAAGa > 2:1666507/1‑141 (MQ=255) cgTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTTGAGTTTTTGCTCGCCGCCAAATTTAAAATCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGGTGCCACTCATCGCCCGCCGGGTAAAGa > 1:489939/1‑141 (MQ=255) cgTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAAATTTTTCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCAACGCCCGCCGGGTAAAGa > 2:1552781/1‑141 (MQ=255) cgTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTAAGGTGCAGTTTTTGCTCGCCGCCAAAATTAAAATCGTCGGAGAGGTAATTTTTTCCGGTTTCGCCGTCGCGGAGCGCCCGTTTCCACTCAAAGCCCGCCGGGTAAAGa > 2:2212406/1‑141 (MQ=255) ttCGCCTTCGGGCTGGGCGGTCGTTTGTTTAAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAAATTTTGCCGGTTTCGCCCTCGCTGAGCGCCACTTGCCACTCAACGCCCGCCGGGTAAAGAcc > 2:364314/1‑141 (MQ=255) ttCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGTGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGAcc > 2:1842344/1‑141 (MQ=255) tCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCa < 1:536902/141‑1 (MQ=255) cGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCaa < 2:1756917/141‑1 (MQ=255) cGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTACTTTTTGCCGGTTTAGGCGTCGCGGTGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGAGCATAGGtat > 2:1473107/1‑141 (MQ=255) cGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTtat < 1:787842/141‑1 (MQ=255) cGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTtat < 1:2554158/141‑1 (MQ=255) ggCTGGGCGGTCGTTTCTTTAAGTTGGAGTTTTTTGTCGCCGCCAAAATTAAAAACGTCGGAGAGGTAATTTTTTCCGGTTTCGCCGTGGCGGAGCGCCAGTTGCCACACATCGCCCCCCGGGTAAAAACCAAAGTTATAg > 1:1017265/1‑141 (MQ=255) cGTTTGTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGAACAAAGTTATAGGTTTTGCCTGc < 1:2120672/141‑1 (MQ=255) cGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGc < 2:199442/141‑1 (MQ=255) ctttcAGATGCAGTTTTTGCTACCACCCAAATATAAAATCGTCGGATAGGTAAATTTTTCCGTTTTAGCCGTCCCTGAGCGCCAATTTACACACAAACACCGCCCGGTAAATAACAAAGTTATAGGTTTTGCCAGCTTTcc > 2:2238404/1‑141 (MQ=255) tcAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCAACGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAgg > 1:2098535/1‑141 (MQ=255) tcAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAAATTTTTCCGGTTTCGCCGTCGCTGAGCGCCAGTTTCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGGCAgg > 1:243169/1‑141 (MQ=255) cAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGa < 2:764281/141‑1 (MQ=255) cAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGa < 1:1041397/141‑1 (MQ=255) aGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAg > 2:269208/1‑141 (MQ=255) gCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGAt > 2:1195664/1‑141 (MQ=255) gCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGAt > 1:87700/1‑141 (MQ=255) gCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGAt < 2:30686/141‑1 (MQ=255) gCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGAt > 1:2175192/1‑141 (MQ=255) gTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTa < 2:2263580/141‑1 (MQ=255) gTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTa < 2:1686411/141‑1 (MQ=255) tttttGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTaa < 1:2323919/141‑1 (MQ=255) tttttGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTaa < 1:1631833/141‑1 (MQ=255) tttttGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTaa < 2:753696/141‑1 (MQ=255) | TCATCATCACTTTGTTGCCATCCGGCAGAATGGCGGTAATGTCACTCAGCGCCTGACGATTCTGGGTAATCACGCGCAGATTCGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAATTTAAAAGCGTCGGAGAGGTAATTTTTGCCGGTTTCGCCGTCGCTGAGCGCCAGTTGCCACTCATCGCCCGCCGGGTAAAGACCAAAGTTATAGGTTTTGCCTGCTTGCCAGGAGCGATCTAA > NC_000913/4244481‑4244748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |