Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,038,7380CT27.2% 852.9 / 284.7 371noncoding (1220/2905 nt)rrlA23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base C (123/147);  new base T (40/61);  total (163/208)
Fisher's exact test for biased strand distribution p-value = 3.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 373 total aligned reads displayed.

ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTA  >  NC_000913/4038598‑4038870
                                                                                                                                               |                                                                                                                                    
  ttAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCtg                                                                                                                                    <  1:1738428/141‑1 (MQ=40)
  ttAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCtg                                                                                                                                    <  2:506235/141‑1 (MQ=40)
    aaagaaagCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCtgtg                                                                                                                                  >  1:1055109/1‑141 (MQ=40)
    aaagaaagCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCtgtg                                                                                                                                  >  1:1801513/1‑141 (MQ=40)
       gaaagCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAGTAGTAAACCGAAGCTGCGGCA‑ATATACT‑TTTGTATATTG‑GGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGc                                                                                                                              <  2:1019666/141‑1 (MQ=1)
         aagCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCtg                                                                                                                                    >  2:779343/1‑134 (MQ=255)
         aagCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCa                                                                                                                             >  2:1581829/1‑141 (MQ=40)
               aaTAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTgg                                                                                                                       <  1:582789/141‑1 (MQ=40)
                 tAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAg                                                                                                                     >  2:1715002/1‑141 (MQ=40)
                 tAGCTCACTAGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAg                                                                                                                     <  1:755188/141‑1 (MQ=2)
                 gaGCTCACTAGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAg                                                                                                                     <  1:259216/140‑1 (MQ=2)
                   gCTCTCTGGTCTAGTCGGCCTGCGCTGAAGTAGTAACGGGTCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTTTGAAGGTGTGCTGTGAGGCATGCTGGAGGt                                                                                                                   <  2:769334/141‑1 (MQ=14)
                     tCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTAt                                                                                                                 >  2:1371233/1‑141 (MQ=40)
                        cTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAGTAGTAAACCGAAGCTGCGGCA‑ATACTCTTTGAG‑‑TATTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGaa                                                                                                            <  2:405857/141‑1 (MQ=11)
                         tGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGa                                                                                                             <  2:1046144/141‑1 (MQ=40)
                          ggTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGaa                                                                                                            <  2:1781228/141‑1 (MQ=40)
                          ggTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGaa                                                                                                            <  2:1793606/141‑1 (MQ=40)
                               aGTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCg                                                                                                       <  1:1112258/141‑1 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCTCAATCCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGTTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:141919/1‑141 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGTTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:513474/1‑141 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:232638/1‑141 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:1973000/1‑141 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTACGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:1840745/1‑141 (MQ=2)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGa                                                                                                      <  2:1840779/141‑1 (MQ=40)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGa                                                                                                      <  2:119563/141‑1 (MQ=40)
                                gTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAAACATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑GGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGa                                                                                                      >  1:633379/1‑141 (MQ=255)
                                 tCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGaa                                                                                                     <  1:1580435/141‑1 (MQ=40)
                                 tCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGaa                                                                                                     <  1:1579270/141‑1 (MQ=40)
                                  cGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAAt                                                                                                    >  1:787001/1‑141 (MQ=2)
                                    gCCTGCGCGGAAGATGTAACGGGGCT‑AAGTAGTAAACCGAAGCTGCGGCA‑ATACTCTTTGAG‑‑TATTG‑GGTAGGGGAGCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTg                                                                                                <  1:900935/141‑1 (MQ=2)
                                    gCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGc                                                                                                  >  1:1493663/1‑141 (MQ=40)
                                    gCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGc                                                                                                  >  1:603862/1‑141 (MQ=40)
                                    gCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGc                                                                                                  >  1:19941/1‑141 (MQ=40)
                                            gttatttGTATCGGGTCT‑AACACATGGAGCGAATCTGCGGGAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAATCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATaa                                                                                          <  2:634251/135‑1 (MQ=14)
                                              aaGATGTAACGGGGCTCAAACCATGCACCGAAGCTACGG‑‑GTATCATCTTATGA‑TGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGt                                                                                        <  1:863671/141‑1 (MQ=2)
                                               aGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTa                                                                                       <  1:2016687/141‑1 (MQ=40)
                                               aGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTa                                                                                       <  2:934073/141‑1 (MQ=40)
                                                gATGTAACGGGGCT‑AAGTTGTAAACCGAAGCTGCGGCA‑ATTCTCTTTGAG‑‑TATTG‑GGTAGGGGTGCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATAAGAAGTGCGAATGCTGACATGAGTAACg                                                                                    <  1:1779721/141‑1 (MQ=2)
                                                gATGTAACGGGGCT‑AAGTAGTAAACCGAAGCTGCGGCA‑ATACTCTTTGAG‑‑TATTG‑GGTAGGGGAGCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACg                                                                                    <  1:1048716/141‑1 (MQ=2)
                                                  tGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACg                                                                                    <  1:620751/141‑1 (MQ=40)
                                                   gTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGa                                                                                   >  1:1951901/1‑141 (MQ=40)
                                                    tAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGAt                                                                                  <  1:1695106/141‑1 (MQ=40)
                                                       cGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATaaa                                                                               >  2:153109/1‑141 (MQ=40)
                                                          ggCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCg                                                                            <  2:476133/141‑1 (MQ=40)
                                                          ggCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCg                                                                            <  2:1666490/141‑1 (MQ=40)
                                                           gCT‑AAACCTTGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:1491950/141‑1 (MQ=255)
                                                           gCT‑AAACCATGCACCGACGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCGGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:955581/141‑1 (MQ=255)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:759703/141‑1 (MQ=40)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:24251/141‑1 (MQ=40)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:1281910/141‑1 (MQ=40)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  1:1159418/141‑1 (MQ=40)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:828298/141‑1 (MQ=40)
                                                           gCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCgg                                                                           <  2:789890/141‑1 (MQ=40)
                                                                aaCCATGCACCGAAGCTGCGGCAGCGACACTCTGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGCGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGa                                                                       <  1:1612519/141‑1 (MQ=255)
                                                                    aTGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAg                                                                   >  1:362725/1‑141 (MQ=40)
                                                                    aTGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAg                                                                   >  1:506017/1‑141 (MQ=40)
                                                                     tGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCAGGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGc                                                                  >  1:1387332/1‑141 (MQ=255)
                                                                            aaGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg                                                           >  2:2000287/1‑141 (MQ=40)
                                                                                   ggCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg                                                    >  1:667968/1‑141 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1761094/141‑1 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1009699/141‑1 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1088523/141‑1 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1456714/141‑1 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1153395/141‑1 (MQ=40)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGGATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1312129/141‑1 (MQ=255)
                                                                                     cAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                  <  2:1901663/141‑1 (MQ=25)
                                                                                      aGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAcc                                                 <  1:933438/141‑1 (MQ=40)
                                                                                       gCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTACTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCa                                                <  2:875085/141‑1 (MQ=255)
                                                                                         gACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAg                                              <  2:1866436/141‑1 (MQ=38)
                                                                                               aTGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTcc                                        <  2:141155/141‑1 (MQ=34)
                                                                                                tgcgt‑tgttG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCt                                       >  1:1490016/4‑141 (MQ=1)
                                                                                                   gtatattg‑GGTAGGGGAGCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACCCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACGATCAAGGGGGTGAAAAACCTCCTCGCCGGAAGACCAAGGGTTCCTGt                                     >  2:735864/6‑141 (MQ=11)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  2:1645180/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  2:956173/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  1:383618/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  1:354541/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  1:306920/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  1:1819362/1‑141 (MQ=32)
                                                                                                    t‑tgttg‑GGAAGGGGAGCGTTCTGTAAGCCGGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCGGTcc                                   >  2:110478/1‑141 (MQ=12)
                                                                                                    t‑tgttc‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc                                   >  1:1229635/1‑141 (MQ=17)
                                                                                                      tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCa                                  >  1:1339444/1‑141 (MQ=32)
                                                                                                      tgttg‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCa                                  >  1:141265/1‑141 (MQ=32)
                                                                                                       attg‑GGTAGGGGAGCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGGGGGTGAAAAACCTCCTCGCCGGAAGACCAAGGGTTCCTGTCCaa                                 >  1:792606/2‑141 (MQ=11)
                                                                                                                    aGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCgacg                     <  1:1504481/141‑4 (MQ=11)
                                                                                                                     gCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGGGGGTGAAAAACCTCCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGc                    <  1:1192686/141‑1 (MQ=11)
                                                                                                                     gCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGGGGGTGAAAAACCTCCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGc                    >  1:1342117/1‑141 (MQ=11)
                                                                                                                     gCGTTCTGTAAGCGGTTGAAGGTGTGTGGTAACGCATGCTGGACGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGGGGGTGAAAAACCTCCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGc                    >  1:1444498/1‑141 (MQ=11)
                                                                                                                     gCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGc                    <  1:1029530/141‑1 (MQ=32)
                                                                                                                     gCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCgacgc                    <  1:1015197/141‑5 (MQ=11)
                                                                                                                     gCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCgacgc                    <  1:1100466/141‑5 (MQ=11)
                                                                                                                       gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAg                  >  1:1666287/1‑141 (MQ=32)
                                                                                                                           tGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCGACGCAGGGtt              <  1:188282/141‑2 (MQ=2)
                                                                                                                           tGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCGACGCAGGGtt              <  1:730341/141‑2 (MQ=2)
                                                                                                                               aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTc          >  2:432716/1‑141 (MQ=32)
                                                                                                                                gCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCg         <  1:332092/141‑1 (MQ=32)
                                                                                                                                gCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCGACGCAGGGTTAGTCg         >  1:1922853/1‑141 (MQ=2)
                                                                                                                                  cTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAc       >  1:1292373/1‑141 (MQ=32)
                                                                                                                                   tgtgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAcc      >  1:1254407/1‑141 (MQ=32)
                                                                                                                                    ttgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAccc     >  1:1506969/2‑141 (MQ=11)
                                                                                                                                    gtgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAccc     >  1:822826/1‑141 (MQ=31)
                                                                                                                                               |                                                                                                                                    
ATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCT‑AAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGT‑TGTTG‑GGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTA  >  NC_000913/4038598‑4038870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑