| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,065,205 | 0 | C | A | 25.9% | 307.0 / 25.3 | 140 | A188S (GCC→TCC) | yihO | putative sulfoquinovose transporter |
| Reads supporting (aligned to +/- strand): ref base C (60/43); new base A (0/36); total (60/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.80e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 141 total aligned reads displayed.
AATATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGG > NC_000913/4065069‑4065344 | aaTATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATaa < 2:1127006/141‑1 (MQ=255)aaTATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATaa < 1:132438/141‑1 (MQ=255)aaTATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATaa < 1:132725/141‑1 (MQ=255)aaTATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATaa < 1:132726/141‑1 (MQ=255)aaTATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATaa < 2:1153784/141‑1 (MQ=255) tatCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAAcc > 1:675670/1‑141 (MQ=255) tatCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAAcc > 2:36191/1‑141 (MQ=255) tatCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAAcc > 2:171842/1‑141 (MQ=255) tCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGa < 1:1209645/141‑1 (MQ=255) gcgcAATATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AAGGGAGAACATAAGTGCCGCACAGGCATAACCGACg > 2:1237186/1‑141 (MQ=255) gcgcAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGCGAACATAAGTGCCGCACAGGCATAACCGACg > 2:147196/1‑141 (MQ=255) gcgcAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACg > 2:949621/1‑141 (MQ=255) gcgcAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACg < 2:285670/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 2:1372548/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 2:1158828/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 2:1372798/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 1:1037144/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 1:1856315/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 1:1037095/141‑1 (MQ=255) tGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTc < 1:1037155/141‑1 (MQ=255) gATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCa > 1:216852/1‑141 (MQ=255) ggCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTg > 2:1169050/1‑141 (MQ=255) ttATGTCCGGTTGGGTTTGTGTCCACATAATGCTCTTTGACGCCTCTGCAGCAAAGCATCAAAAAAATAATCCCCCC‑ATTGGTTAACTTAAGTGCCGCCCCGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAAc < 2:265429/141‑1 (MQ=255) tATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACg > 2:1320024/1‑141 (MQ=255) tATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACg > 2:495575/1‑141 (MQ=255) tATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACg > 2:497012/1‑141 (MQ=255) ggTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATaaa > 1:354529/1‑141 (MQ=255) gCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCa > 2:1783418/1‑141 (MQ=255) ggTTTTGTCCAAATATTGTTGTTTGACGCCTGGTTTGAACCGCTTAATATAAATAATGCCGCC‑ATTGGAGAACTTATGTGCCGCACAGGAATACCATACGTTTTAGTATTAAAAAAGCGACTGCAACGGAATAAACGCCAc < 2:1804705/140‑1 (MQ=255) ggTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCCCC‑AATGGAGAACATAAGTGCCGCACCGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCAc < 2:1000175/140‑1 (MQ=255) ggTTGTGTAAACATATTGATCTTTTACGCCTCTGTCGCACAGAATCATAAAAATAATGCGGCA‑ATTGGACAAAATATGTGCCGCACTGTCATAACCGCCGGTTGAGTCTGAAAAAAGCGACTGCAACGGAATAAACGCCAc < 2:38931/140‑1 (MQ=255) ctttGTGACAACATAATCCTCTTTGACGCATCTTTAGCACAGCATAATAAAAATAAACCCGCA‑AATGGACAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCATAAAAAAGCGACTGCAACGGAATAAACGCCAc < 2:38873/139‑1 (MQ=255) cGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCAc > 2:1604408/1‑141 (MQ=255) cGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCAc < 2:1106081/141‑1 (MQ=255) tgtCAACATAATGCTCTTTGACGCCTCTTTAGAACAGCATCATAAAAATAAAGCCGCC‑AATGGATAACATATGTGCCGCACAGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTAc < 2:875791/141‑1 (MQ=255) tatgtatctTTCACGCATTTTTACCACAGAAAAATAAAAATAACGCCGCC‑AATGTATAACATACGGGCCGCACTGGAATAACCGCGGGTTGTTTAATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAAt < 1:216189/135‑1 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:542567/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:1649229/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:873035/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:1199730/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:873108/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:873130/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:381151/1‑141 (MQ=255) aaTGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa > 2:381071/1‑141 (MQ=255) aaTGCACTTTGACGCCTCTGTAGCACAGCAACATAAAAATAACGCCGCC‑AATGGAGAACATACGTCCCGCACAGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATACACGCCACGGTACAAATCAATa < 2:1491169/141‑1 (MQ=255) aaTGATATTTGACGCCTCTGTAGCACAGAAAAAAAAAAATAACGCCGCA‑ATTGGAGAACATATGGCCCCCACAGGAATAACCGACGGTTGAGTAATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATa < 1:1393965/141‑1 (MQ=255) aTGCTCTTTGACGCCTCTTTAGAAAAGAATAATAAAAATAAAGCCGCC‑ATTGTATAACATAAGTGCCGAAAAGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAg < 2:89845/141‑1 (MQ=255) tGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGc > 1:849426/1‑141 (MQ=255) tGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGc > 1:849409/1‑141 (MQ=255) tatttGCCGCCTCTGTAGCACAGCATAAAAAAAATAAACCCGCC‑ACGGGACAACATAGGGGCCGCACCGGAATACCCGCGGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCt < 1:1979659/139‑1 (MQ=255) ctTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTa > 2:475482/1‑141 (MQ=255) ctTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTa > 1:1480580/1‑141 (MQ=255) ctTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTa > 1:1480565/1‑141 (MQ=255) ctTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCA‑AATGGAGAACATAAGTGCCGCACAGGAATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTa < 2:1665440/141‑1 (MQ=255) ttGACGCCTCTGCAGCACACCACAAAAAAAAACACCCCGCC‑AACGGAGAACATAAGGGGCCCACCGCCAAAACCGACGGTTGTGACAGAAAAAAGCGACTGCAACGGAATCAACGCCACGGTACAAATCAATAGCCCTATg < 2:539557/141‑1 (MQ=255) ttGACGCCAGTGGCGCACCGAATAATAAAAATAAAGCCGCC‑AATGGTGAACATACGTGCCGCACAGGAATAACCGCCGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATg < 2:1960526/141‑1 (MQ=255) tGACGCCTCTTTAGCACACAATCATAAAAATAAACCCCCC‑ATTTAACAAAATACGTCCCCAACAGGCATACCCCACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 1:1762664/141‑1 (MQ=255) tGACGCCTCTTTACCACACAATAAAAAAAATAAACCCCCA‑AATTAAGAAAATACGTGCCCCACTGGAATACCCGAGGTTTGTGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 1:1762712/141‑1 (MQ=255) tGACGCCTCTGTAGCACACCATCAAAAAAATAAAGCCGCA‑AATGGATAACAAATGTGCCGCACAGGAATAACCGCCGGTTGAGTCATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 2:144044/141‑1 (MQ=255) tGACGCCTCTGTACCACAGAATCATAAAAATAACCCCCCA‑AATTAACACCATACGGGCCGCACAGGAATAACCCACGGTTGATTAACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 1:1762766/141‑1 (MQ=255) tGACGCATTTTTAGAAAAGCATAATAAAAAAAAAGCCGCA‑ATTGTATAACATACGTGCCGAACAGGAATAACCGAGGGTTTAGACATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 2:1555209/141‑1 (MQ=255) ggACGCCTATGTAGCACTGCATCATAAAAATAAAGCCGCC‑ATTGGATAACATAAGTGCCGCACTGGCATACCCCCCGGTGGAGCCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATgg < 2:1470818/140‑1 (MQ=255) taCGCATCTTTAGCACAGAATCATAAAAATAAAGCCGCC‑AAGGGATAACATAAGTGCCGCACTGGAATACCCGACGGTTTAGTCACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:662401/140‑1 (MQ=255) gccGCCTCTTTAGCACAGAAAAATAAAAAAAACCCCGCC‑AATGGATAACATACGTGCCGCACAGCAATAACCGAGGGTTGAGACATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 1:1876237/139‑1 (MQ=255) gACGCCTGTGTAGCACAGAAAAATAAAAATAAAGCCGCC‑AATGGATAAAATATGTGCCGCACTGGAATAACCGACGGTTGAGTAAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:1860302/141‑1 (MQ=255) gACGCCTCTTTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGACAACATAAGTGCGGCACAGGAATACCCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:464922/141‑1 (MQ=255) gACGCCTCTGTAGCACCGCATAATAAAAATAACGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCTTAACCTACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:796365/141‑1 (MQ=255) gACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGACAACATCAGTGCCGCACAGGCATAACCGCCGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:259108/141‑1 (MQ=255) gACGCCTCTGTAGCACAGAATAATAAAAATAAACCCGCC‑AATGTAGAAAATAAGTGCCCCACCGGAAAAACCGAGGGTTGAGTCTTAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:549480/141‑1 (MQ=255) gACGCATCTGTACCACATAATCATAAAAATAAACCCGCC‑AATGGAGAACATAAGTGCCGCACAGGAATAACCGACGTTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGt < 2:1032581/141‑1 (MQ=255) aCGCCTCTTTAGCACAGAATAATAAAAATAACGCCGCC‑ATTGTACAACTTAAGGGCCCCACAGCAAAAACCGCCGGTTGAGACAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGtt < 1:1673448/141‑1 (MQ=255) ccTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGca > 1:779651/1‑141 (MQ=255) tctGTAGCACAGCATAATAAAAATAAAGCCGCA‑ATTGTAGAAAATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGcacc < 2:42248/141‑1 (MQ=255) aGCACACCAACATAAAAATAAAGCCGCC‑AATGGACAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCt < 2:1209400/141‑1 (MQ=255) cacaGCATCAAAAAAATACCGCCGCC‑AAGGTACAAAATACGTGCCGCACCGGAATACCCGCGGTTTGAGACACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTgg < 1:235293/141‑1 (MQ=255) acaGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGc > 1:1271069/1‑141 (MQ=255) acaGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGc > 1:1271138/1‑141 (MQ=255) acaGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGc > 1:121401/1‑141 (MQ=255) gCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGt > 2:1751614/1‑141 (MQ=255) aaacaaaaaaaaaaCCCCGCA‑ATTGTACAACATAAGTGCCGCACCGGAATACCCGAGGGTTGAGAAACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTa < 1:591854/135‑1 (MQ=255) atcatAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTaa > 1:150736/1‑141 (MQ=255) aaaaaaaaaaaaaACCCCCCAAATGCACAACAAAAGAGCCCCACCGCAAACACCGCCGGTTGAGACACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTa < 1:738837/136‑1 (MQ=255) tcaaAAAAAAAACGCCCCC‑AATGGACAACATATGGGCCCCACCGCAAAACCCGCCGGTTGAGTCACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAg < 1:612040/141‑1 (MQ=255) acaaaaaaaaaaCCCCCCC‑AAGGGACAACATACGTGCCGCACAGCCATAACCGAGGTTTGAGTCAAAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAg < 1:787052/137‑1 (MQ=255) aaaaaaaaaaaaGGCCGCC‑ATTGGACAACATTTGTGCCCAACTGTCAAAACCGCCGTTTGTTTCATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAg < 1:787042/137‑1 (MQ=255) aaTAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAg > 2:333208/1‑141 (MQ=255) aaTAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAg > 1:602588/1‑141 (MQ=255) gcc‑ATTGGATAACATACGTGCCGCACAGGCATAACCGACGGTTGAGACAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTgcgcgcg < 1:834980/141‑1 (MQ=255) caattGGACAACATACGTGCCGCACCGCAATAACCGACGGTTGAGACAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTgcgcgcgc < 1:1877985/137‑1 (MQ=255) c‑AATGTAGAAAATAAGTGCCGCAAAGGCATAACCGACGGTTGATTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCt < 2:2025805/141‑1 (MQ=255) aaaTGGAGAACATACGTGCCGCACAGCAATACCCGAGGGTTGTGTCACAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCt < 1:55489/140‑1 (MQ=255) gagaACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTc > 2:667743/1‑141 (MQ=255) gagaACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTc > 2:1601559/1‑141 (MQ=255) gaACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCgg > 2:2014331/1‑141 (MQ=255) atctgTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGttt < 2:1662837/137‑1 (MQ=255) aaGTGCCGCACAGGCATAACCGCCGGTTGAGTCATAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGttttt < 2:1283222/141‑1 (MQ=255) aaGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGttttt < 2:895766/141‑1 (MQ=255) gCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTa > 1:487033/1‑141 (MQ=255) gCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGG‑TTTTGGTaa > 2:823672/1‑141 (MQ=255) cactgccATACCCGACGGTTGAGACAGAAAAACGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTg < 1:654962/135‑1 (MQ=255) | AATATCGCGCAAAATGATTTGAGAATACTGGCTTTATGTCCGGTTGGCGTTGTGTCCACATAATGCTCTTTGACGCCTCTGTAGCACAGCATCATAAAAATAAAGCCGCC‑AATGGAGAACATAAGTGCCGCACAGGCATAACCGACGGTTGAGTCAGAAAAAAGCGACTGCAACGGAATAAACGCCACGGTACAAATCAATAGCCCTATGGTTGCACCACCCTGGCGGTAAGCCGCGAGCTGCGCGCGCTCATTCGGGTTTTTGGTAATTGCCGGG > NC_000913/4065069‑4065344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |