Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,560,455 +G intergenic (+589/+167) rtcR → / ← glpG DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,560,4551.G100.0% 340.4 / NA 90intergenic (+589/+167)rtcR/glpGDNA‑binding transcriptional activator RtcR/rhomboid protease GlpG
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (38/52);  total (38/52)

CGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAC  >  NC_000913/3560315‑3560589
                                                                                                                                              |                                                                                                                                      
cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGc                                                                                                                                         >  2:1790930/1‑141 (MQ=255)
cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGc                                                                                                                                         >  2:401309/1‑141 (MQ=255)
cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGc                                                                                                                                         >  2:466921/1‑141 (MQ=255)
cGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGc                                                                                                                                         >  2:467353/1‑141 (MQ=255)
 gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGcg                                                                                                                                        <  1:1859936/141‑2 (MQ=255)
   tAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGcgca                                                                                                                                      <  1:235877/141‑4 (MQ=255)
   tAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGcgca                                                                                                                                      <  1:1754610/141‑4 (MQ=255)
     aaCAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGcgcagg                                                                                                                                    >  1:876414/1‑136 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  1:315500/141‑1 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  2:897319/141‑1 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  1:406539/141‑1 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  1:1315640/141‑1 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  2:945958/141‑1 (MQ=255)
       cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAt                                                                                                                                  <  2:1459021/141‑1 (MQ=255)
        aGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATc                                                                                                                                 >  1:1344210/1‑141 (MQ=255)
             cGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGtt                                                                                                                            <  1:1263928/141‑1 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:1384728/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:1641666/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:974422/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:1043443/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:1040996/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  2:732087/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTc                                                                                                                      >  1:1203083/1‑141 (MQ=255)
                   aTTGGGGATTTGCTCCGCCACTTTGCGGGCCTGGCTCTCAATTTCTTCGGTCTGGGCCCACGGTCTATCGTGCCCCCGCGTGTATAACGAACTGGAAGGCAGCGCC‑TATCGCACATGATGCCGCCGGATCAGCATTTGCTc                                                                                                                      >  2:729660/1‑141 (MQ=255)
                      ggggATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGc                                                                                                                   <  1:1148497/141‑1 (MQ=255)
                      ggggATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGc                                                                                                                   <  1:1494169/141‑1 (MQ=255)
                         gATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAg                                                                                                                <  2:951018/141‑1 (MQ=255)
                         gATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAg                                                                                                                <  2:951038/141‑1 (MQ=255)
                          aTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGc                                                                                                               <  1:1615224/141‑1 (MQ=255)
                          aTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGc                                                                                                               <  1:293998/141‑1 (MQ=255)
                          aTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGc                                                                                                               <  1:467353/141‑1 (MQ=255)
                          aTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGc                                                                                                               <  1:466921/141‑1 (MQ=255)
                             tGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCa                                                                                                            >  1:574018/1‑141 (MQ=255)
                                           gCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggcg                                                                                              >  1:1290193/1‑141 (MQ=255)
                                           gCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggcg                                                                                              >  2:931669/1‑141 (MQ=255)
                                           gCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggcg                                                                                              >  1:1290161/1‑141 (MQ=255)
                                             gggCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGaa                                                                                            >  1:1201934/1‑141 (MQ=255)
                                              ggCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAt                                                                                           >  2:225531/1‑141 (MQ=255)
                                                 gATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGGGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGAGCAGGTTTTGCTCCGCCAGCTCATGGAGGTCGCGGCGAATAGt                                                                                        >  2:1406614/1‑141 (MQ=255)
                                                             ttcttcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGAc                                                                            <  1:1836625/141‑1 (MQ=255)
                                                                 tcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag                                                                        >  2:1108606/1‑141 (MQ=255)
                                                                 tcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag                                                                        >  1:347349/1‑141 (MQ=255)
                                                                 tcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag                                                                        >  1:1161691/1‑141 (MQ=255)
                                                                 tcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGgag                                                                        >  2:1108592/1‑141 (MQ=255)
                                                                   ggTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGaa                                                                      >  1:353890/1‑141 (MQ=255)
                                                                   ggTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGaa                                                                      >  2:1397717/1‑141 (MQ=255)
                                                                                  gCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGctc                                                       >  1:1590981/1‑141 (MQ=255)
                                                                                  gCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGctc                                                       >  1:1299168/1‑141 (MQ=255)
                                                                                    gATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAGATGGTCTACCAGCGCtt                                                     >  2:1509633/1‑141 (MQ=255)
                                                                                    gATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCtt                                                     >  2:365932/1‑141 (MQ=255)
                                                                                    gATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCtt                                                     >  1:1504980/1‑141 (MQ=255)
                                                                                       cGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCgg                                                  >  1:992513/1‑141 (MQ=255)
                                                                                       cGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTATACCAGCTCTTCgg                                                  >  1:992508/1‑141 (MQ=255)
                                                                                        gTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACAGC‑CATGATCGCGCAGGATCAGGTTTTGATCCGCCAGCTCAGTGAGGTCGCGCCGAATAGTCTGCTGGCAGACGGAGAAATGCTCTACAAGCTCTTCGGt                                                 >  2:1743690/1‑141 (MQ=255)
                                                                                           ccACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt                                              <  2:1198570/141‑1 (MQ=255)
                                                                                           ccACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt                                              <  1:473832/141‑1 (MQ=255)
                                                                                           ccACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt                                              <  1:1927583/141‑1 (MQ=255)
                                                                                           ccACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt                                              <  2:1198537/141‑1 (MQ=255)
                                                                                                      tAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct                                   <  2:1804007/141‑1 (MQ=255)
                                                                                                      tAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCct                                   <  1:1350060/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGTGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1898229/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1915813/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1911129/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:644408/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:798864/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:798949/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:185020/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:888274/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:888340/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:1869441/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:1157111/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1504980/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:225531/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:1714477/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:401309/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:518481/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:570240/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:653141/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  1:653151/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:185019/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1461396/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1202958/141‑1 (MQ=255)
                                                                                                       aaCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctg                                  <  2:1344210/141‑1 (MQ=255)
                                                                                                        aCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgc                                 <  1:918172/141‑1 (MQ=255)
                                                                                                        aCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgc                                 >  2:1919162/1‑141 (MQ=255)
                                                                                                        aCCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgc                                 >  2:1917989/1‑141 (MQ=255)
                                                                                                          cGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgctg                               <  1:1591516/141‑1 (MQ=255)
                                                                                                          cGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgctg                               >  1:371351/1‑141 (MQ=255)
                                                                                                            aaCTGGAAGGCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt                             >  2:384056/1‑141 (MQ=255)
                                                                                                                    ggCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGt                     <  1:733275/141‑1 (MQ=255)
                                                                                                                    ggCAGCGCCGCACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGt                     <  1:1261956/141‑1 (MQ=255)
                                                                                                                         cgccgcACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGat                <  1:1677413/141‑1 (MQ=255)
                                                                                                                          gccgcACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGata               >  1:226701/1‑141 (MQ=255)
                                                                                                                              cACCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc           <  1:1877081/141‑1 (MQ=255)
                                                                                                                               aCCGC‑CATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATTATAcc          <  2:805950/141‑1 (MQ=255)
                                                                                                                                        gatgGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAc  >  2:91836/1‑141 (MQ=255)
                                                                                                                                        gatgGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAc  >  1:294190/1‑141 (MQ=255)
                                                                                                                                        gatgGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAc  >  1:1439484/1‑141 (MQ=255)
                                                                                                                                              |                                                                                                                                      
CGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGC‑CATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGAC  >  NC_000913/3560315‑3560589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑