| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,801,828 | Δ10,193 bp | [nrdE]–[emrA] | [nrdE], nrdF, proV, proW, proX, ygaZ, ygaH, mprA, [emrA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2801828 | 2812020 | 10193 | 68 [7] | [3] 63 | [nrdE]–[emrA] | [nrdE],nrdF,proV,proW,proX,ygaZ,ygaH,mprA,[emrA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2801827 | 7 (0.070) | 59 (0.590) | 30/260 | 0.6 | 92.5% | coding (480/2145 nt) | nrdE | ribonucleoside‑diphosphate reductase 2 subunit alpha |
| ? | NC_000913 | 2812021 = | 3 (0.030) | coding (595/1173 nt) | emrA | multidrug efflux pump membrane fusion protein EmrA | |||||
CCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAACGACGCCGCTGATG > NC_000913/2811881‑2812158 | tgaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccg < 2:1188653‑M2/1‑1 (MQ=255)tgaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccg < 2:1188261‑M2/1‑1 (MQ=255) gaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGt > 2:1707021‑M2/140‑141 (MQ=255) gaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGt > 1:219446‑M2/140‑141 (MQ=255) gaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGt > 1:304637‑M2/140‑141 (MQ=255) gaagacattcgacggtaaacgttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGt > 1:307950‑M2/140‑141 (MQ=255) cgtgatctggaagattttgccgctcgaggaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgcaatgcagtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGaa < 2:1217809‑M2/21‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:1265785‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:983715‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 1:1403409‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt > 1:1249741‑M2/119‑141 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:1197026‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:351283‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:1265681‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:1197090‑M2/23‑1 (MQ=255) ttatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGt < 2:1197040‑M2/23‑1 (MQ=255) tatctggaagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTa > 1:17866‑M2/118‑141 (MQ=255) aagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACg > 1:1235450‑M2/111‑141 (MQ=255) aagattttgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACg > 1:1233773‑M2/111‑141 (MQ=255) cgcgACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCctgg > 1:1905807/1‑141 (MQ=255) tgccgatcgagtaacgatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCctggct < 1:429444‑M2/38‑1 (MQ=255) tGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTAc > 1:1694743/1‑141 (MQ=255) gatggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTAc < 2:219446‑M2/53‑1 (MQ=255) tggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTc < 1:589623‑M2/55‑1 (MQ=255) tggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTc < 1:589649‑M2/55‑1 (MQ=255) tggtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTc < 1:589654‑M2/55‑1 (MQ=255) gtggcgctgacgctggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGt < 1:1570908‑M2/57‑1 (MQ=255) tggcgctgacgctggcacaaggcggtgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGta < 2:60527‑M2/58‑1 (MQ=255) ggcacaaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGAt > 2:1755846‑M2/71‑141 (MQ=255) tCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGa > 1:1057842/1‑141 (MQ=255) caaggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGAcc < 1:1531180‑M2/75‑1 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg < 2:1412089‑M2/77‑1 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 1:388525‑M2/65‑141 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 2:1636505‑M2/65‑141 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 1:494720‑M2/65‑141 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 1:437824‑M2/65‑141 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 1:437819‑M2/65‑141 (MQ=255) aggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCgg > 2:1831829‑M2/65‑141 (MQ=255) ggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGt < 2:1521372‑M2/78‑1 (MQ=255) ggcgatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGt < 2:1579819‑M2/78‑1 (MQ=255) gatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTAt > 1:1253832‑M2/61‑141 (MQ=255) gatgagacgctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTAt > 1:1253814‑M2/61‑141 (MQ=255) gctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGATGTACGTAACGCCTGGCTGGCGCTGGTGCGTACTCGGATTATCAGTCCGATGACCGGTGATGTCTCccg > 2:1699335‑M2/53‑141 (MQ=255) gctggcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCccg > 2:1289135‑M2/53‑141 (MQ=255) gcgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCcgccgc < 1:1642388‑M2/93‑1 (MQ=255) cgttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcg > 2:124104‑M2/48‑141 (MQ=255) gttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcgc < 1:122601‑M2/95‑1 (MQ=255) gttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcgc < 2:1617613‑M2/95‑1 (MQ=255) gttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcgc < 1:46613‑M2/95‑1 (MQ=255) gttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcgc < 1:1921607‑M2/95‑1 (MQ=255) gttgcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCcgcgc < 1:1583201‑M2/95‑1 (MQ=255) gcaactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGt > 2:989194‑M2/44‑141 (MQ=255) aactgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTAc < 2:524608‑M2/100‑1 (MQ=255) tgaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGc > 1:1688485‑M2/39‑141 (MQ=255) gaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGcc > 2:1588925‑M2/38‑141 (MQ=255) gaccgatgaaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGcc > 1:797008‑M2/38‑141 (MQ=255) aaatgctgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGgcgc < 2:1269211‑M2/112‑1 (MQ=255) tgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTa < 2:1576431‑M2/118‑1 (MQ=255) tgtcaggacgctttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTa < 2:1855181‑M2/118‑1 (MQ=255) tttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAacgacg < 1:1740075‑M2/129‑1 (MQ=255) tttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAacgacg < 1:1699400‑M2/129‑1 (MQ=255) tttcagccagccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAacgacg > 1:1329567‑M2/13‑141 (MQ=255) gccGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAACGACGCCGCTGATg > 1:1637942‑M2/4‑141 (MQ=255) | CCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAACGACGCCGCTGATG > NC_000913/2811881‑2812158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |