Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,523,4740GT70.9% 170.3 / 113.4 118R207R (CGC→CGA) yjhGKpLE2 phage‑like element; D‑xylonate dehydratase
Reads supporting (aligned to +/- strand):  ref base G (8/26);  new base T (38/45);  total (46/72)
Fisher's exact test for biased strand distribution p-value = 3.64e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 118 total aligned reads displayed.

GCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATC  >  NC_000913/4523340‑4523608
                                                                                                                                      |                                                                                                                                      
gCCAGTCCCATTCCTTCGGCCACCACCTGAGATGTCCCGGCAGGGCCCAAAATTTGACAGCCGCCGCCGGACGAGGCACAGGCGTTACTGCCCGCACGGCGTGCGTCCTGTAGTGATAATTCGCCATTGGCGAATCGGgcg                                                                                                                                  >  2:1698215/1‑141 (MQ=255)
    gTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCaa                                                                                                                              <  1:256101/141‑1 (MQ=255)
     tCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             <  1:804637/141‑1 (MQ=255)
     tCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             <  1:869443/141‑1 (MQ=255)
      cccAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATg                                                                                                                            <  1:1753466/141‑1 (MQ=255)
      cccAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATg                                                                                                                            <  2:625385/141‑1 (MQ=255)
      cccAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATg                                                                                                                            <  2:625509/141‑1 (MQ=255)
      cccAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATACGCCATTGGCGAATCGTGCGCCAATg                                                                                                                            <  2:625459/141‑1 (MQ=255)
          aTCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             <  1:90532/136‑1 (MQ=255)
          aTCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             >  2:92775/1‑136 (MQ=255)
          aTCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             >  2:90532/1‑136 (MQ=255)
          aTCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             <  1:92775/136‑1 (MQ=255)
          aTCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAt                                                                                                                             >  2:91176/1‑136 (MQ=255)
              ttCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCAc                                                                                                                    >  1:1604801/1‑141 (MQ=255)
                        accTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAAGTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTg                                                                                                          <  2:1262243/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGGCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  1:130463/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACGGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  1:130632/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  1:1269041/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  2:1809444/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  2:1809479/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  2:1053742/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  2:1054885/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  1:687504/141‑1 (MQ=255)
                          cTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGtc                                                                                                        <  1:923151/141‑1 (MQ=255)
                          cTGAGACGACCCGGCACTGCCCAACCACAGACAGCCGCCGCCGGAAGAGGCACAGGCTTAACACCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAACGTGCGCCAATGGTTAGCACCTTCCCGTTGtc                                                                                                        <  2:1170200/141‑1 (MQ=255)
                                tGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTcc                                                                                                  >  2:1684181/1‑141 (MQ=255)
                                tGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTcc                                                                                                  >  1:1379453/1‑141 (MQ=255)
                                 gTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCa                                                                                                 >  1:1754282/1‑141 (MQ=255)
                                 gTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCa                                                                                                 >  1:35227/1‑141 (MQ=255)
                                  tCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCAt                                                                                                >  2:496678/1‑141 (MQ=255)
                                  tCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCAt                                                                                                >  2:496569/1‑141 (MQ=255)
                                  tCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCAt                                                                                                >  2:496650/1‑141 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCAt                                                                                                <  1:503965/140‑1 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCAt                                                                                                >  2:503965/1‑140 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               >  2:643049/1‑141 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               >  2:678304/1‑141 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               >  2:958815/1‑141 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTGTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               >  2:643048/1‑141 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               <  1:984969/141‑1 (MQ=255)
                                   cccGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATc                                                                                               <  1:345372/141‑1 (MQ=255)
                                         aGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGc                                                                                         <  2:1785683/141‑1 (MQ=255)
                                          gTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCg                                                                                        >  2:945604/1‑141 (MQ=255)
                                          gTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCg                                                                                        >  2:1863231/1‑141 (MQ=255)
                                          gTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCg                                                                                        <  1:26028/141‑1 (MQ=255)
                                          gTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCg                                                                                        >  2:1902728/1‑141 (MQ=255)
                                           tGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCgg                                                                                       >  1:614048/1‑141 (MQ=255)
                                                 aaaaTTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCg                                                                                 >  2:795782/1‑141 (MQ=255)
                                                    aTTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTcg                                                                              >  1:1180601/1‑141 (MQ=255)
                                                    aTTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTcg                                                                              >  1:1648603/1‑141 (MQ=255)
                                                        ccacccgccgccgGAAGACGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCCGTAGAGATACTTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGCCTCCACCATCCTGTGCGGGCAGCGTCGcgcc                                                                          <  1:89808/137‑1 (MQ=255)
                                                        ccAGCCGCCGCCGGAAGACGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATACTTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  2:1526616/140‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:840394/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  2:1790763/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  2:1669192/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:839964/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCACTGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  2:1108932/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:576017/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:20498/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:89819/141‑1 (MQ=255)
                                                        aCAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTGTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  1:925341/141‑1 (MQ=255)
                                                           gccgccgccGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCgccgcc                                                                       >  2:450672/1‑141 (MQ=255)
                                                             cgccgccgGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCgg                                                                     <  1:1184048/141‑1 (MQ=255)
                                                             cgccgccgGAAGACGCACCGGCTTGACAGCCCGCACGGCGTGCGTCCAGTAGACATAATACGCCATTGGCGAATCGAGCGCCCAAGGTTTGCACCTTGCCGTTGACATCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCgg                                                                     <  2:363752/141‑1 (MQ=255)
                                                               ccgccgGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCgggg                                                                   <  2:1485600/141‑1 (MQ=255)
                                                               ccgccgGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCgggg                                                                   <  2:549580/141‑1 (MQ=255)
                                                               ccgccgGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCAACTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCgggg                                                                   <  2:1857273/141‑1 (MQ=255)
                                                                cgccgGAAGAGGCACAGGCTTTACCGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGATTGCACCTTGCCGTTGTCTTCGCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGa                                                                  <  2:1552400/141‑1 (MQ=255)
                                                                  ccgGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGAcc                                                                <  1:1122778/141‑1 (MQ=255)
                                                                             acaGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGc                                                     <  1:385003/141‑1 (MQ=255)
                                                                             acaGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGc                                                     <  1:385066/141‑1 (MQ=255)
                                                                             acaGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGc                                                     <  1:385009/141‑1 (MQ=255)
                                                                             acaGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAAGGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGc                                                     <  2:201384/141‑1 (MQ=255)
                                                                                  cTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGAtgt                                                <  2:791434/141‑1 (MQ=255)
                                                                                    ttACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGAtgttg                                              >  1:79829/1‑141 (MQ=255)
                                                                                    ttACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGAtgttg                                              >  1:79786/1‑141 (MQ=255)
                                                                                    ttACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGAtgttg                                              <  1:1362418/141‑1 (MQ=255)
                                                                                          cccGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          >  1:1054167/1‑107 (MQ=255)
                                                                                          cccGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGcgcc                                                                          <  2:1054167/107‑1 (MQ=255)
                                                                                          cccGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGtgctgc                                        >  1:173637/1‑141 (MQ=255)
                                                                                             gCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGcgcg                                     >  2:349960/1‑141 (MQ=255)
                                                                                                 ggCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGa                                 >  2:30667/1‑141 (MQ=255)
                                                                                                 ggCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGa                                 >  2:30639/1‑141 (MQ=255)
                                                                                                 ggCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGa                                 >  2:30311/1‑141 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:496678/141‑1 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               >  1:1110887/1‑141 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:1903243/141‑1 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:1351223/141‑1 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:496650/141‑1 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:1348259/141‑1 (MQ=255)
                                                                                                   cgtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGACAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGt                               <  1:496569/141‑1 (MQ=255)
                                                                                                    gtgcgtCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTg                              <  1:1765735/141‑1 (MQ=255)
                                                                                                      gcgtCCTGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGGTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGGTGCGATGTTGTGCTGCGCGGCGAGTGcc                            >  1:258707/1‑141 (MQ=255)
                                                                                                            tGTAGAGATAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCAtg                      >  1:924776/1‑141 (MQ=255)
                                                                                                                 agaTAAGTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGc                 <  2:1168706/141‑1 (MQ=255)
                                                                                                                  gaTAATTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGcc                >  2:834855/1‑141 (MQ=255)
                                                                                                                     aaTTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGa             <  2:664700/141‑1 (MQ=255)
                                                                                                                     aaTTCGCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGa             >  2:1025865/1‑141 (MQ=255)
                                                                                                                          gCCATTGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGccc        >  2:849987/1‑141 (MQ=255)
                                                                                                                               tGGCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGGTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTAt   >  1:744983/1‑141 (MQ=255)
                                                                                                                                ggCGAATCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATc  <  1:958815/141‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                      
GCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTGCCCAAAAATTGACAGCCGCCGCCGGAAGAGGCACAGGCTTTACAGCCCGCACGGCGTGCGTCCTGTAGAGATAATTCGCCATTGGCGAAGCGTGCGCCAATGGTTTGCACCTTGCCGTTGTCTTCTCCATCCTTTGCGGGCAGCGTCGCGCCGCCGGGGACCAGCACGGTTGCGATGTTGTGCTGCGCGGCGAGTGCCATCATGGTGGCCGGAAGCCCCTTATC  >  NC_000913/4523340‑4523608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑