| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,509,739 | +T | pseudogene (261/315 nt) | insO → | KpLE2 phage‑like element; IS911B regulator fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,509,739 | 1 | . | T | 76.7% | 711.5 / 219.0 | 240 | pseudogene (261/315 nt) | insO | KpLE2 phage‑like element; IS911B regulator fragment |
| Reads supporting (aligned to +/- strand): ref base . (28/28); new base T (103/81); total (131/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 240 total aligned reads displayed.
CAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACG > NC_000913/4509601‑4509875 | cAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑Ga < 1:1689799/141‑1 (MQ=255) aGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATc > 1:1189764/1‑141 (MQ=255) cagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGaaaa > 1:144073/2‑141 (MQ=255) gaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAAcc > 1:86297/1‑141 (MQ=255) gAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATAc < 1:1645913/141‑1 (MQ=255) aaTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATAc > 2:660127/1‑141 (MQ=255) aaTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATAc > 2:266302/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACt < 1:443444/137‑1 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 1:1890122/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 1:1719455/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 2:1245331/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 2:546710/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 2:406812/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 1:1115537/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaa > 2:1995561/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGaaa > 1:61875/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGaaa > 1:62133/1‑141 (MQ=255) gTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGaaa > 1:2150110/1‑141 (MQ=255) tGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGaaa > 2:836467/1‑141 (MQ=255) gACGGGCTATGTCCGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTa < 2:364794/141‑1 (MQ=255) gACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTa < 2:880329/141‑1 (MQ=255) gACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTa < 1:639443/141‑1 (MQ=255) aCGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTaa < 2:1878571/141‑1 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt > 2:604347/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt > 1:2039622/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt > 2:1019381/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt > 1:1762162/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 1:1047230/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 1:2059064/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 1:1626798/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 1:851834/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 2:501488/1‑141 (MQ=255) gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtt > 1:365403/1‑141 (MQ=255) ttCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGttt > 1:1896494/1‑141 (MQ=255) ttCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGttt > 2:393649/1‑141 (MQ=255) cAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTa > 1:1793211/1‑141 (MQ=255) cAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTa > 2:1643166/1‑141 (MQ=255) gCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGt < 2:1818011/141‑1 (MQ=255) gCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGAcc < 2:774040/141‑1 (MQ=255) aGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACcaca < 1:1178111/141‑1 (MQ=255) tCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCacaac > 1:1519016/1‑141 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt < 1:709095/141‑1 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt < 2:339584/141‑1 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt < 2:1376448/141‑1 (MQ=255) cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACt < 1:1967104/141‑1 (MQ=255) aTAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc < 1:1361568/141‑1 (MQ=255) aTAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc < 1:936216/141‑1 (MQ=255) aTAACGGACTATATCGTTGGATATGACAGCGCACTAAGACCGCACGAATAGAATGGTGGGGTACCACCAAAA‑GAATCAGAAAACCGATCCGGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc < 2:816389/141‑1 (MQ=255) tAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc < 2:2150232/141‑1 (MQ=255) tAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc > 1:232666/1‑141 (MQ=255) tAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc > 1:1001148/1‑141 (MQ=255) tAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc > 1:1337039/1‑141 (MQ=255) aCGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTg > 1:1470072/1‑141 (MQ=255) cTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAggg > 1:1086543/1‑141 (MQ=255) tataTCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGa < 2:1001078/141‑1 (MQ=255) gTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCcgcg > 1:1310300/1‑141 (MQ=255) aCAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGc > 1:1972692/1‑141 (MQ=255) aCAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGc > 2:201933/1‑141 (MQ=255) gcgcACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGt > 2:1407174/1‑141 (MQ=255) gcACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTg > 1:1802142/1‑141 (MQ=255) aCTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCa < 2:133490/141‑1 (MQ=255) cTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAg < 2:1719455/141‑1 (MQ=255) tAAGACCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGt < 1:1573234/141‑1 (MQ=255) aaGACCGCACGTATATAATGGTGGGTTACCACCAAACTGAATAAGATAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGAGGTCGCCTGGCAGTTGCAGTa < 2:1261421/141‑1 (MQ=255) aCCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCa > 1:1249261/1‑141 (MQ=255) aCCGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCa > 1:1096912/1‑141 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTACCGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 2:937413/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 1:1558447/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 2:473379/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 2:1519016/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 2:1186135/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 1:1785265/141‑1 (MQ=255) ccGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAg < 1:256540/141‑1 (MQ=255) cGCACGAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAgg < 1:1027875/141‑1 (MQ=255) gAATATAATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatc > 1:220245/1‑141 (MQ=255) ataATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 1:463066/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACACCAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:1914779/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 1:546334/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:765293/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:1950503/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:657245/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:634394/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:843148/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:2026231/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:2079038/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:1346833/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:144073/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:158352/141‑1 (MQ=255) taATGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa < 2:1770075/141‑1 (MQ=255) aTGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGc > 2:377045/1‑141 (MQ=255) aTGGTGGGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGc > 2:743071/1‑141 (MQ=255) tggtggGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGcc < 1:492573/141‑1 (MQ=255) ggtggGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCg > 1:1515491/1‑141 (MQ=255) ggtggGTTACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCg > 1:1220786/1‑141 (MQ=255) gTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTAc < 1:1750640/141‑1 (MQ=255) ttACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTAc < 1:1996989/141‑1 (MQ=255) ttACCACCAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTAc < 1:789086/141‑1 (MQ=255) accaccAAACTGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAg > 1:910903/1‑141 (MQ=255) caAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACg > 1:272725/1‑141 (MQ=255) caAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACg > 1:397924/1‑141 (MQ=255) | CAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAAC‑GAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACG > NC_000913/4509601‑4509875 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |