BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	508649 =	111 (0.930)	23 (0.230) +CGGCAAGCGTCGCATCAGGCA	14/238	2.0	20.5%	intergenic (+90/+226)	ybaQ/copA	DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase
*	?	NC_000913	= 4296059	99 (0.830)	23 (0.230) +CGGCAAGCGTCGCATCAGGCA	14/238	2.0	20.5%	intergenic (+265/+377)	gltP/yjcO	glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO

Only 100 of 129 total aligned reads displayed.

TTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTC  >  NC_000913/4295926‑4296197

ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctga                                                                                                                                     <  2:1188004‑M2/141‑8 (MQ=255)

ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctga                                                                                                                                     <  2:1421319‑M2/141‑8 (MQ=255)

ttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctga                                                                                                                                     <  1:1779222‑M2/141‑8 (MQ=255)

      cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgac                                                                                                                               >  1:1070485‑M2/1‑128 (MQ=255)

        cACCCGCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAATTAGCGAGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgc                                                                                                                             >  2:836598‑M2/1‑126 (MQ=255)

                  cAACGCCTGATGCGACGCTTCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTc                                                                                                                   <  2:1236185/141‑1 (MQ=37)

                       ccTGATGCGACGCTTG‑CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatca                                                                                                             <  2:122315‑M2/141‑32 (MQ=255)

                       ccTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                                                              <  2:2113352/141‑1 (MQ=37)

                        cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAATGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                                                             >  1:1295973/1‑141 (MQ=12)

                        cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAATGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                                                             >  1:30231/1‑141 (MQ=255)

                        cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                                                             <  1:875712/141‑1 (MQ=37)

                        cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGACAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatca                                                                                                             <  2:145878‑M2/141‑32 (MQ=255)

                         tGATGCGACGCTTAACTCGACTTATCAGGCATACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGTATAAGGCGTTTACGCCGCATCCGACAT‑CATCGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                            >  1:1070153/1‑141 (MQ=11)

                         tGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatcag                                                                                                            <  2:892539‑M2/141‑33 (MQ=255)

                           aTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatcaggc                                                                                                          <  1:1418252‑M2/141‑35 (MQ=255)

                           aTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCCTATCAGGc                                                                                                          >  1:704553/1‑141 (MQ=37)

                            tGCGACGCTTCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                         <  1:1414903/141‑1 (MQ=37)

                            tGCGACGCTTCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                         <  1:1980851/141‑1 (MQ=37)

                             gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                        <  1:774063/141‑1 (MQ=37)

                             gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                        <  1:774045/141‑1 (MQ=37)

                               gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTat                                                                                                      >  2:1971253/1‑140 (MQ=37)

                               gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                      <  1:1523320/141‑1 (MQ=37)

                                    ttAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatcaggcctatcttaa                                                                                                 <  2:813490‑M2/141‑44 (MQ=255)

                                    ttAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAagcctgatgcgacgcttgccgcgtcttatcaggcctatcttaa                                                                                                 <  2:903571‑M2/141‑44 (MQ=255)

                                      aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGAc                                                                                               <  1:175486/141‑1 (MQ=37)

                                           gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcgc                                                                                          >  2:169841/1‑141 (MQ=37)

                                            tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTATGTAGATTTTAAAGGTCTGAGCCTGCGATTAAGACGCATCCGTCAT‑TAACGCGTGAGGCGAAGGATGTCGCGACTTATCTGGGCTACGCCTGAGAgcgga                                                                                         >  2:1124713/1‑139 (MQ=2)

                                             cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa                                                                                        >  1:1427844/1‑141 (MQ=37)

                                              ttATCAGGCCGACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt                                                                                       <  2:758437/141‑1 (MQ=37)

                                                         aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgt                                                                                                                    >  1:1306772‑M2/1‑77 (MQ=255)

                                                         aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGt                                                                                                                    >  2:1306772/1‑101 (MQ=40)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTTTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       <  2:1623883/141‑1 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CATCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGTCAGCGCAATTGCCTGATTGAGCGTg                                                                       >  2:1322806/1‑141 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatcaggcctacaaaaggtgccagaaccgtaggccggataagg                                                                       <  2:167966‑M2/141‑70 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtcttatcaggcct                                                                                                        >  1:1794776‑M2/1‑72 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAagcctgatgcgacgcttgccgcgtcttatcaggcct                                                                                                        <  2:1794776‑M2/108‑37 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGcc                                                                                                                        <  1:1509451/92‑1 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGcc                                                                                                                        >  2:1509451/1‑92 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCGTACGCCAGACTGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:768421/1‑141 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGGAAGACAGCGCAATAGACTGATTTAGCTTg                                                                       >  2:1867060/1‑141 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACCGCGCTATAGCCTGATATAGCGTg                                                                       >  2:1527264/1‑141 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:47624/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:123275/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:1468594/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1866913/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1252935/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:952919/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:887200/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1596531/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1794897/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:772939/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1867260/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:693590/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  2:1739816/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:47645/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:47546/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGTg                                                                       >  1:588553/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGGTAGCGTg                                                                       >  1:1872693/1‑141 (MQ=255)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCGGATTTAGCGTg                                                                       >  2:91870/1‑141 (MQ=37)

                                                              aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg                                                                       >  1:1246564/1‑141 (MQ=37)

                                                               gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGa                                                                      >  1:301980/1‑141 (MQ=17)

                                                               gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgc                                                                                                                             >  2:1000720‑M2/1‑71 (MQ=255)

                                                               gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGc                                                                                                                             >  1:1000720/1‑86 (MQ=33)

                                                               gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGa                                                                      <  2:1714028/141‑1 (MQ=37)

                                                               gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGa                                                                      <  1:79649/141‑1 (MQ=37)

                                                                aCAGCTCAATAGCCTGATTTAGCGTGATTTTTTAGTTCGGATAAGGCGTTTACGCCGCTTCCGTCAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAt                                                                     <  2:1901647/141‑1 (MQ=11)

                                                                   gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtc                                                                                                                   >  1:392591‑M2/1‑67 (MQ=255)

                                                                   gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAAtgcctgatgcgacgcttgccgcgtc                                                                                                                   <  2:392591‑M2/92‑26 (MQ=255)

                                                                   gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt                                                                  >  2:401376/1‑141 (MQ=37)

                                                                          aGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc                                                           <  1:62861/141‑1 (MQ=37)

                                                                          aGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc                                                           <  1:693937/141‑1 (MQ=17)

                                                                             cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGa                                                        >  1:544046/1‑141 (MQ=37)

                                                                                aTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa                                                     >  2:645365/1‑141 (MQ=37)

                                                                                aTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa                                                     >  2:645337/1‑141 (MQ=37)

                                                                                    aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCg                                                 >  1:1645570/1‑141 (MQ=37)

                                                                                    aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCg                                                 >  1:1645597/1‑141 (MQ=37)

                                                                                       gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGttt                                              <  1:772939/141‑1 (MQ=37)

                                                                                                   gTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCg                                  >  2:473270/1‑141 (MQ=37)

                                                                                                   gTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCAAGACATCGCAATATGCTTATTTCGCGTGATTTTGTAGGTCGTATAAGGCGTTTATGCAGCATcag                                  >  2:473236/1‑139 (MQ=11)

                                                                                                    tCGGATCAGGCGTTTACGCCGCATCCGACAT‑CAACGCCGGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  2:1077926/141‑1 (MQ=255)

                                                                                                    tCGGATAAGGCGTTTATGCCGCATCCGACAT‑CAACGCCTGCTGCGACGCTTGCCGCGTCTTAACAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  2:301980/141‑1 (MQ=12)

                                                                                                    tCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  2:1246564/141‑1 (MQ=37)

                                                                                                    tCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  1:860175/141‑1 (MQ=37)

                                                                                                    tCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  1:860196/141‑1 (MQ=37)

                                                                                                    tCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  1:1252935/141‑1 (MQ=37)

                                                                                                    tCGGATAAGGCGTTTAAGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa                                 <  2:1077914/141‑1 (MQ=21)

                                                                                                       gATAAGGCGTTTACGCCGCATCCGACAT‑CATCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt                              >  1:897690/1‑141 (MQ=37)

                                                                                                          aaGGCGTTCACGCCGCATCCGGCATTCAGtgcctgatgcgacgctgacgcgtcttatcaggcctacaaacttgtgcctgaaccgtaggccggataaggcgtttacgccgcatccggcatccgagcaccattgcctgatgcg                            >  1:1002377‑M2/1‑29 (MQ=255)

                                                                                                          aaGGCGTTCACGCCGCATCCGGCATTCAGtgcctgatgcgacgctgacgcgtcttatcaggcctacaaacttgtgcctgaaccgtaggccggataaggcgtttacgccgcatccggcatccgagcaccattgcctgatgcg                            >  1:877781‑M2/1‑29 (MQ=255)

                                                                                                          aaGGCGTTCACGCCGCATCCGGCATTCAGtgcctgatgcgacgctgacgcgtcttatcaggcctacaaacttgtgcctgaaccgtaggccggataaggcgtttacgccgcatccggcatccgagcaccattgcctgatgcg                            >  1:1632804‑M2/1‑29 (MQ=255)

                                                                                                           aGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAtttgc                          <  2:629750/141‑5 (MQ=37)

                                                                                                                tttACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTCTGCCGCATCCGACATCAACGCCTg                     >  1:1744460/1‑141 (MQ=255)

                                                                                                                 ttACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAATGCCTGa                    >  1:1130722/1‑141 (MQ=37)

                                                                                                                 ttACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAATGCCTGa                    >  1:1130614/1‑141 (MQ=37)

                                                                                                                 ttACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa                    >  2:1698597/1‑141 (MQ=21)

                                                                                                                 ttACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAACAGAGACAGCGCAATATAGTGATTTATCTTGAGATTCTTGGTCTGATAATGCGTTTATGCAGCATCCTACATCAACGACTGa                    >  2:734313/1‑141 (MQ=2)

                                                                                                                      ccgcACCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTAACAGGCCTACGCCAGACAGCGCATTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCTTCCGTCTTCAACGCCTGATGCGa               <  1:1512140/141‑1 (MQ=11)

                                                                                                                       cgcATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAAGCCTGATGCGAc              >  1:19529/1‑141 (MQ=21)

                                                                                                                                  t‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt   <  1:401376/141‑1 (MQ=33)

                                                                                                                                    cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc  <  1:129435/141‑1 (MQ=32)

TTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAT‑CAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTC  >  NC_000913/4295926‑4296197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.