ALEdb 1.1.0
  • Login
  • Dashboard
  • Search
  • Projects
  • Experiments
  • Global Filter
  • About
  • LTEE: LTEE Ara
  •    Metadata
  •    Mutations
  •    Converged Mutations
  •    Fixed Mutations
  •    Filter
«

LTEE: LTEE Ara - Experiment Stats

Stats | Metadata | Mutations | Converged Mutations | Fixed Mutations | Filter
Notes

Publication:

10.1038/nature18959

Hypermutator samples were excluded.
Flask were named after generations.
No resequencing data available.

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 11 22
2 11 22
3 4 8
4 11 22
5 11 22
6 5 10
7 54 107

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 326 1394
Multiple Base Substitutions 2 8
Deletions 133 621
Insertions 42 169
Mobile Element Insertions 151 622
Amplifications 25 117
Gene Conversions 1 1
Inversions 1 3
Total 681 2935

ALE experiment functional change counts

Functional Change Type Unique Observed
Intergenic 143 604
Noncoding 1 2
Pseudogene 10 46
Synonymous 0 0
Nonsynonymous 0 0
Total 154 652

Mutation Needle Plot

Mutation Targets

Entries to show