Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
10 10 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 921 932
Multiple Base Substitutions 1 1
Deletions 77 84
Insertions 103 121
Mobile Element Insertions 2 10
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 1104 1148

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F13 I1 R1 106 0 290.2 13814944 99.7% 13773499 98.4
A2 F13 I1 R1 114 0 305.6 14428468 99.7% 14385182 98.6
A3 F13 I1 R1 185 0 260.8 12342668 99.6% 12293297 98.5
A4 F13 I1 R1 108 0 324.7 15372274 99.7% 15326157 98.5
A5 F13 I1 R1 111 0 382.4 18081076 99.7% 18026832 98.6
A6 F13 I1 R1 131 0 334.0 15923330 99.7% 15875560 98.4
A7 F13 I1 R1 81 0 380.2 18134756 99.7% 18080351 98.4
A8 F13 I1 R1 116 0 362.0 17214306 99.7% 17162663 98.4
A9 F13 I1 R1 112 0 360.8 17302090 99.7% 17250183 98.5
A10 F13 I1 R1 84 0 286.4 14512654 99.7% 14469116 98.4

Mutation Needle Plot

Mutation Targets

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