Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 3 8
1 3 8

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 700 5442
Multiple Base Substitutions 5 35
Deletions 40 309
Insertions 57 442
Mobile Element Insertions 0 0
Amplifications 17 21
Gene Conversions 0 0
Inversions 0 0
Total 819 6249

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F15 I1 R1 782 0 634.5 21863942 98.1% 21448527 138.4
A1 F15 I1 R2 781 0 700.4 23289492 98.5% 22940149 138.2
A1 F15 I1 R3 782 0 676.6 23254289 97.6% 22696186 138.5
A1 F15 I1 R4 781 0 701.7 22683696 98.1% 22252705 139.0
A1 F15 I1 R5 785 0 665.2 22963641 98.6% 22642150 138.1
A1 F21 I1 R7 781 0 589.5 21734725 98.3% 21365234 134.3
A1 F50 I1 R1 782 0 316.7 10427156 97.0% 10114341 138.2
A1 F50 I1 R2 775 0 327.3 10718052 97.2% 10417946 138.8

Mutation Needle Plot

Mutation Targets

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