Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 2
7 4 7
11 4 8
13 1 1
4 10 18

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 19 45
Multiple Base Substitutions 0 0
Deletions 1 1
Insertions 2 4
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 22 50

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 38 0 349.1 12082612 97.9% 11828877 90.9
A0 F0 I1 R1 11 0 352.9 12342938 98.2% 12120765 90.8
A7 F17 I1 R1 11 0 20.2 476812 94.0% 448203 140.9
A7 F42 I0 R1 26 0 47.1 1070894 94.9% 1016278 139.9
A7 F42 I1 R1 12 0 20.5 472558 94.6% 447039 140.9
A7 F57 I0 R1 14 0 10.6 235668 98.4% 231897 141.0
A7 F57 I1 R1 13 0 31.8 742348 93.6% 694837 140.9
A7 F72 I0 R1 28 0 64.2 1451946 95.2% 1382252 140.0
A7 F72 I1 R1 13 0 24.0 557538 94.9% 529103 140.9
A11 F18 I0 R1 17 0 28.5 664000 94.6% 628144 140.9
A11 F18 I1 R1 9 0 7.8 173730 98.5% 171124 141.0
A11 F42 I0 R1 23 0 53.7 1221430 95.4% 1165244 139.9
A11 F42 I1 R1 11 0 101.1 2428408 94.2% 2287560 136.3
A11 F58 I0 R1 20 0 33.6 768826 95.4% 733460 140.9
A11 F58 I1 R1 13 0 39.5 930764 93.2% 867472 140.9
A11 F75 I0 R1 26 0 40.8 921404 95.2% 877176 139.9
A11 F75 I1 R1 15 0 33.9 790044 94.1% 743431 140.9
A13 F16 I0 R1 17 0 29.2 691516 93.7% 647950 139.9

Mutation Needle Plot

Mutation Targets

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