New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1 =	0 (0.000)	58 (0.270)	35/242	10.6	100%	intergenic (–/+146)	–/parB	–/probable chromosome‑partitioning protein
	?	AE015451	= 6181873	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–
Rejected: Coverage evenness skew score above cutoff.

AGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/124‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGG  <  AE015451/6181873‑6181750                                                                                                                                                                                                                                                          AGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTG                                                                                                                             <  1:76/125‑1    CGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGA                                                                                                                          <  1:93/125‑1     GGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGA                                                                                                                          <  2:176/124‑1      GAAATCACTACCGAAGCGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATG                                                                                                                        <  1:177/125‑1      GAAATCACTACCGAAGAGTTGAATAAGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATG                                                                                                                        <  1:5/125‑1       AAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGG                                                                                                                       <  1:26/125‑1       AAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGAT                                                                                                                         <  1:50/123‑1            ACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATA                                                                                                                  <  1:7/125‑1            ACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATA                                                                                                                  <  1:140/125‑1               ACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATAC                                                                                                                 <  1:45/123‑1                CCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCA                                                                                                              <  2:6/125‑1                CCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCA                                                                                                              <  2:71/125‑1                CCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCA                                                                                                              <  1:72/125‑1                 CGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCAC                                                                                                             <  1:3/125‑1                 CGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCA                                                                                                              <  2:23/124‑1                    AGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCC                                                                                                          <  1:4/125‑1                     GAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCA                                                                                                         <  1:182/125‑1                      AGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCA                                                                                                         <  1:8/124‑1                      AGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCA                                                                                                         <  1:207/124‑1                      AGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCA                                                                                                         <  1:15/124‑1                         TGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACC                                                                                                     <  1:1/125‑1                         TGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAA                                                                                                       <  1:309/123‑1                          GAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCG                                                                                                    <  1:34/125‑1                          GAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCG                                                                                                    <  2:67/125‑1                            ATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCC                                                                                                  <  2:119/125‑1                            ATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAAC                                                                                                      <  2:234/121‑1                               GGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCC                                                                                                  <  2:146/122‑1                                    TAATCCACCCCTATGCTCTGCGCGCATTTTTTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAAC                                                                                                      <  2:85/113‑1                                               TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACTCAGGCGAAACCGCCTGC                                                                                               <  2:79/109‑1                                                                      GCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACG                                                                                                                <  2:350/69‑1                                                                                    AAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGC                                                                                                           <  2:323/60‑1                                                                                                  TTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTT                            >  1:5407865/1‑125                                                                                                    tTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  1:5407859/2‑125                                                                                                    GTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407861/1‑125                                                                                                    GTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407863/1‑125                                                                                                    GTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407864/1‑125                                                                                                    GTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCT                             >  1:5407867/1‑122                                                                                                     TTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407862/1‑124                                                                                                     TTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCT                             >  2:5407866/1‑121                                                                                                      TGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTG                        >  1:5407857/1‑125                                                                                                      TGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTG                        >  2:5407856/1‑125                                                                                                        GTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTT                      >  1:5407854/1‑125                                                                                                         TCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTT                      >  2:5407855/1‑124                                                                                                         TCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407860/1‑120                                                                                                           GACTTCCGAGGAGCAGTTGTGATGGAAATACGCAAGCCAAACCGCCTGCCTTTCCAT                                                                                       >  2:5407870/1‑57                                                                                                            ACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGG                  >  2:5407853/1‑125                                                                                                             CTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGC                 >  2:5407851/1‑125                                                                                                             CTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCAAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGC                 >  1:5407852/1‑125                                                                                                                CCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCA                >  2:5407850/1‑123                                                                                                                  GAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTG             >  1:5407849/1‑124                                                                                                                   AGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGG                          >  2:5407858/1‑110                                                                                                                         AGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGG      >  2:5407847/1‑124                                                                                                                          GTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTGCTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGG      >  1:5407846/1‑123                                                                                                                          GTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGT     >  1:5407845/1‑124                                                                                                                          GTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACC                              >  1:5407868/1‑99                                                                                                                           TTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCG   >  1:5407844/1‑125                                                                                                                            TGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGG  >  2:5407842/1‑125                                                                                                                            TGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGG  >  1:5407843/1‑125                                                                                                                                                                                                                                                          AGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/124‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGG  <  AE015451/6181873‑6181750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.