New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1 =	0 (0.000)	58 (0.270)	35/242	10.6	100%	intergenic (–/+146)	–/parB	–/probable chromosome‑partitioning protein
	?	AE015451	= 6181873	0 (0.000)					intergenic (‑3/–)	atpI/–	ATP synthase protein I/–
Rejected: Coverage evenness skew score above cutoff.

CCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑  >  AE015451/6181750‑6181873                                                                                                                            |     ccgaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAca     <  1:5407843/125‑2 (MQ=255) ccgaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAca     <  2:5407842/125‑2 (MQ=255)  cgaccCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAcaa    <  1:5407844/125‑3 (MQ=255)    accCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAcaac   <  1:5407845/124‑4 (MQ=255)     cccTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAcaact  <  2:5407847/124‑5 (MQ=255)     cccTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGCACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAcaac   <  1:5407846/123‑4 (MQ=255)                             ggTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAcaac   <  1:5407868/99‑4 (MQ=255)                                                                                                                            |     CCGACCCTTTCCACTGCCACAACACCAAGGTTGCCAGCAGCAGTACGACAAATTGAGCCAGCAGTACCGGAAAAACCGCCCAGCGATGGAAAGGCAGGCGGTTTGGCGTGCGTATTTCCATCAC‑‑‑‑  >  AE015451/6181750‑6181873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.