| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2478415 = | 36 (0.190) | 5 (0.030) | 5/196 | 16.6 | 15.4% | coding (112/444 nt) | PP_2172 | conserved exported protein of unknown function |
| ? | AE015451 | = 2478405 | 25 (0.160) | coding (102/444 nt) | PP_2172 | conserved exported protein of unknown function | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACCCCATGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2478557‑2478415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccaccaccaccaccaccCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGCTC < AE015451/2478405‑2478290 ACCCCATGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGC > 1:1961330/1‑124 CCATGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCAC < 2:1961378/124‑1 ATGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCAC > 1:1961329/1‑122 TGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCACGCCACCGCCATGTCCGGCACCGTTCCCACCGCCATGACCACCGCCACCGCCACC > 2:1961327/1‑122 gtTCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACC < 2:1961499/119‑1 ATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCA > 1:1961325/1‑124 TCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACC < 1:1961599/122‑1 CGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACC < 1:1961416/124‑1 GCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCTCCGCCATGACCTCCGCCACCGCCACCACCACC < 2:1961424/123‑1 GCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCA < 1:1961410/118‑1 GTGTCGCCTTTCCAGCGTGACCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACC < 2:1961373/124‑1 GCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCA < 2:1961352/117‑1 ATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGACACCGTTTCCACCGCCATGACCACCGCCACCCCCACCCCCACCACCAC > 2:1961323/1‑107 CACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCACCACCCTTGGCATAGGC > 1:1961317/1‑121 TGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCAC > 2:1961324/1‑76 CCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGG > 2:1961312/1‑116 CCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCAC > 2:1961328/1‑57 ATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGC > 2:1961311/1‑111 TCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCAC > 2:1961326/1‑44 CCACCGCCACCGCCACCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACC > 1:1961303/1‑120 CCACCGCCACCGCCACCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTG < 2:1961381/94‑1 CCACCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTT > 1:1961301/1‑124 CCACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAATCAAAGGTTTTTTCATTTTT > 2:1961300/1‑123 CACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTT < 1:1961402/123‑1 CACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTT < 2:1961341/122‑1 ACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGT > 2:1961299/1‑124 ACCACCACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTT < 1:1961397/119‑1 CCACCACCACCCTTGACATAGGCGGAACTGATCGGGGAGATATCGGAGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTC > 2:1961298/1‑122 CACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTT < 2:1961372/120‑1 CACCACCACCCGTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGC < 2:1961353/124‑1 ACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGCT < 1:1961321/124‑1 ACCACCACCCTTGGCATAGGCGGAACTGATCGGGGAAATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGCT < 1:1961354/124‑1 CCACCACCCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCCAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGCTC > 2:1961297/1‑124 ACCCCATGATCGCGTGTCGCCTTTCCAGCGTGATCACTTCCAAGGCCCTTCCCGCTTCCACTATGCCCTCCCATGCCACCGCCATGTCCGGCACCGTTTCCACCGCCATGACCACCGCCACCGCCACCACCACCACCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2478557‑2478415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccaccaccaccaccaccCTTGGCATAGGCGGAACTGATCGGGGAGATATCGGCGGGCAAGAATGCCGTCATCCCGAGTGCCAATGCACAAGCAAAGACAGCAACCAAAGGTTTTTTCATTTTTTGTTCGGCTC < AE015451/2478405‑2478290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |