Predicted mutation
evidence seq id position mutation annotation gene description
JC AE015451 5,681,415 +CGGG intergenic (‑133/+71) PP_4986 ← / ← PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 56814150 (0.000)193 (1.080)
+CGGG
116/228 0.2 100% intergenic (‑133/+71) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein
?AE015451 5681416 = 0 (0.000)intergenic (‑134/+70) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

Only 100 of 203 total aligned reads displayed.

GACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCG  >  AE015451/5681292‑5681537
                                                                                                                           |                                                                                                                          
  cctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcg                                                                                                                          >  2:4335158‑M1/1‑122 (MQ=255)
   ctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCc                                                                                                                           >  1:4335162‑M1/1‑121 (MQ=255)
         aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGTGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctg                                                                                                                    <  2:4334958‑M1/123‑9 (MQ=255)
         aGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgc                                                                                                                   <  1:4334957‑M1/124‑10 (MQ=255)
           gTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctg                                                                                                                 <  1:4334963‑M1/124‑12 (MQ=255)
           gTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgct                                                                                                                  <  2:4334965‑M1/123‑11 (MQ=255)
              ggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcg                                                                                                               <  2:4334968‑M1/123‑14 (MQ=255)
               gCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgca                                                                                                             <  2:4334970‑M1/124‑16 (MQ=255)
                 tGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagc                                                                                                           >  2:4335301‑M1/1‑107 (MQ=255)
                 tGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgca                                                                                                             <  2:4334972‑M1/122‑16 (MQ=255)
                  gggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagc                                                                                                           <  1:4334973‑M1/123‑18 (MQ=255)
                   ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccc                                                                                                         <  2:4334975‑M1/124‑20 (MQ=255)
                   ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc                                                                                                          >  1:4335145‑M1/1‑105 (MQ=255)
                    gTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcag                                                                                                            >  2:4335237‑M1/1‑104 (MQ=255)
                     ttCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc                                                                                                          >  2:4335182‑M1/1‑103 (MQ=255)
                       ccTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccc                                                                                                         >  2:4335199‑M1/1‑101 (MQ=255)
                          gttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc                                                                                                          >  1:4335197‑M1/1‑98 (MQ=255)
                           ttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcga                                                                                                 <  2:4334979‑M1/124‑28 (MQ=255)
                            tgtgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACcgc                                                                                                                            <  2:4334981/96‑1 (MQ=255)
                            tgtgATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcg                                                                                                    >  2:4335417‑M1/1‑96 (MQ=255)
                                 tGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaag                                                                                           <  2:4334985‑M1/124‑34 (MQ=255)
                                  gCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaag                                                                                           <  1:4334986‑M1/123‑34 (MQ=255)
                                      aTGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgc                                                                                      <  2:4334991‑M1/124‑39 (MQ=255)
                                      aTGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaagg                                                                                          <  1:4334990‑M1/120‑35 (MQ=255)
                                         gCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCATGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc                                                                                                          >  1:4335272‑M1/1‑83 (MQ=255)
                                          cTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcc                                                                                   >  1:4335288‑M1/1‑82 (MQ=255)
                                          cTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcg                                                                                                               >  1:4335257‑M1/1‑82 (MQ=255)
                                              gTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacccaaggccgctcccactc                                                                              >  1:4335238‑M1/1‑78 (MQ=255)
                                              gTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcagggctgctg                                                                                                                 >  1:4335315‑M1/1‑78 (MQ=255)
                                                 cTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCGAACCGCCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactcc                                                                             <  2:4334994‑M1/122‑48 (MQ=255)
                                                  tttGTGGGAGCGGCCTTGTGTCGCCAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccaga                                                                          >  1:4335282‑M1/1‑74 (MQ=255)
                                                   ttGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagac                                                                         <  1:4334996‑M1/124‑52 (MQ=255)
                                                    tgtgGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagac                                                                         >  2:4335247‑M1/1‑72 (MQ=255)
                                                      tgGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccac                                                                      >  2:4335293‑M1/1‑70 (MQ=255)
                                                      tgGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccac                                                                      <  2:4334999‑M1/124‑55 (MQ=255)
                                                          aGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccagg                                                                  >  2:4335253‑M1/1‑66 (MQ=255)
                                                          aGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccagg                                                                  <  1:4335001‑M1/124‑59 (MQ=255)
                                                              gCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccc                                                               <  2:4335002‑M1/123‑62 (MQ=255)
                                                              gCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggc                                                                 >  2:4335109‑M1/1‑62 (MQ=255)
                                                                 ttGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcg                                                           >  1:4335390‑M1/1‑59 (MQ=255)
                                                                 ttGTGTCGCGAAAGGGGCGCGAAGCAGCCTCAGACTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcg                                                           >  1:4335447‑M1/1‑59 (MQ=255)
                                                                  tgtgTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgc                                                          >  1:4335264‑M1/1‑58 (MQ=255)
                                                                    tgtCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctg                                                             <  2:4335004‑M1/119‑64 (MQ=255)
                                                                      tCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctc                                                       <  1:4335006‑M1/123‑70 (MQ=255)
                                                                        gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccatgccctgcgcc                                                         >  2:4335464‑M1/1‑52 (MQ=255)
                                                                        gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctc                                                       >  2:4335261‑M1/1‑52 (MQ=255)
                                                                         cgAAAGGGGCGCGAAGCGGCCCTAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctca                                                      <  1:4335010‑M1/121‑71 (MQ=255)
                                                                         cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacat                                                   >  2:4335214‑M1/1‑51 (MQ=255)
                                                                         cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacat                                                   >  2:4335307‑M1/1‑51 (MQ=255)
                                                                         cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcaca                                                    <  2:4335009‑M1/123‑73 (MQ=255)
                                                                          gAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatc                                                  >  2:4335409‑M1/1‑50 (MQ=255)
                                                                           aaaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatc                                                  >  1:4335305‑M1/1‑49 (MQ=255)
                                                                           aaaGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacat                                                   <  2:4335012‑M1/122‑74 (MQ=255)
                                                                             aGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagccca                                                                       >  2:4335518‑M1/1‑47 (MQ=255)
                                                                              ggggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactc                                                                              >  1:4335241‑M1/1‑46 (MQ=255)
                                                                               gggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaac                                             <  2:4335014‑M1/124‑80 (MQ=255)
                                                                                   gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag                                         <  1:4335018‑M1/124‑84 (MQ=255)
                                                                                   gcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag                                         <  1:4335016‑M1/124‑84 (MQ=255)
                                                                                    cgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag                                         >  1:4335322‑M1/1‑40 (MQ=255)
                                                                                     gAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaagg                                        <  2:4335020‑M1/123‑85 (MQ=255)
                                                                                      aaGCGGCCCCAGGCTTTCATTGCCCCTGCATGAACCGCcgggg                                                                                                                       >  1:4335340‑M1/1‑38 (MQ=255)
                                                                                      aaGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctaccgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaa                                          >  2:4335137‑M1/1‑38 (MQ=255)
                                                                                       aGCGGCCCCAGGCTTTCATTGCCACTCCCTAGCCCGCcggggctgctgcgcagcactatggcgacacaaggccgctcccactccagaccaccaggccctgcgcctcaca                                                    <  2:4335023‑M1/109‑73 (MQ=255)
                                                                                         cGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcagg                                   <  2:4335026‑M1/124‑90 (MQ=255)
                                                                                         cGGCCCCAGGCTTCCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaa                                          <  1:4335024‑M1/117‑83 (MQ=255)
                                                                                          ggCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatc                                                  <  1:4335028‑M1/108‑75 (MQ=255)
                                                                                          ggCCCCAGGCTTTAATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcct                                                        >  2:4335330‑M1/1‑34 (MQ=255)
                                                                                            ccccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggt                                  <  1:4335031‑M1/122‑91 (MQ=255)
                                                                                             cccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaacccaggtcaggtt                                 >  1:4335297‑M1/1‑31 (MQ=255)
                                                                                                aGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcag                                    >  2:4335266‑M1/1‑28 (MQ=255)
                                                                                                aGGCTTTCACTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactc                                                                              <  2:4335033‑M1/74‑47 (MQ=255)
                                                                                                  gCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc                          <  2:4335040‑M1/124‑99 (MQ=255)
                                                                                                  gCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc                          <  1:4335038‑M1/124‑99 (MQ=255)
                                                                                                  gCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc                          <  2:4335037‑M1/124‑99 (MQ=255)
                                                                                                  gCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc                          <  1:4335034‑M1/124‑99 (MQ=255)
                                                                                                      tCATTGCCACTGCATGATTCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatc                                                  <  2:4335044‑M1/96‑75 (MQ=255)
                                                                                                       cATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggcccctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgt                     <  2:4335047‑M1/124‑104 (MQ=255)
                                                                                                       cATTGCCACTGCAGGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccgctccagaccaccaggccctgcgccacacatcctaaccaaggtcaggttgcagatccgc                       <  1:4335046‑M1/122‑102 (MQ=255)
                                                                                                        aTTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgc                               <  2:4335049‑M1/113‑94 (MQ=255)
                                                                                                            ccACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacg                 >  1:4335331‑M1/1‑16 (MQ=255)
                                                                                                             cACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgc                <  2:4335052‑M1/123‑109 (MQ=255)
                                                                                                              aCTGCATGATCCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac              <  1:4335053‑M1/124‑111 (MQ=255)
                                                                                                               cTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac              >  2:4335223‑M1/1‑13 (MQ=255)
                                                                                                                tGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcacca            <  1:4335056‑M1/124‑113 (MQ=255)
                                                                                                                tGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcacca            <  2:4335057‑M1/124‑113 (MQ=255)
                                                                                                                  cATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcac              <  2:4335059‑M1/120‑111 (MQ=255)
                                                                                                                  cATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggt                                       >  1:4335290‑M1/1‑10 (MQ=255)
                                                                                                                   aTGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccgccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcc         <  1:4335060‑M1/124‑116 (MQ=255)
                                                                                                                   aTGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagc          >  1:4335355‑M1/1‑9 (MQ=255)
                                                                                                                    tGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagc          >  2:4335274‑M1/1‑8 (MQ=255)
                                                                                                                    tGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggcc                                                                >  2:4335360‑M1/1‑8 (MQ=255)
                                                                                                                       aCCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttc     >  1:4335466‑M1/1‑5 (MQ=255)
                                                                                                                         cgccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttc     <  1:4335073‑M1/122‑120 (MQ=255)
                                                                                                                         cgccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagccttt      <  2:4335072‑M1/121‑119 (MQ=255)
                                                                                                                         cgccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagccttt      <  1:4335078‑M1/121‑119 (MQ=255)
                                                                                                                         cgccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctt       <  2:4335067‑M1/120‑118 (MQ=255)
                                                                                                                          gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaa  >  2:4335318‑M1/1‑2 (MQ=255)
                                                                                                                          gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaa  <  1:4335069‑M1/124‑123 (MQ=255)
                                                                                                                          gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagccttt      <  2:4335080‑M1/120‑119 (MQ=255)
                                                                                                                           ccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaa  >  2:4335269‑M1/1‑1 (MQ=255)
                                                                                                                           |                                                                                                                          
GACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCG  >  AE015451/5681292‑5681537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.