Predicted mutation
evidence seq id position mutation annotation gene description
JC AE015451 5,681,415 +CGGG intergenic (‑133/+71) PP_4986 ← / ← PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 56814150 (0.000)193 (1.080)
+CGGG
116/228 0.2 100% intergenic (‑133/+71) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein
?AE015451 5681416 = 0 (0.000)intergenic (‑134/+70) PP_4986/PP_4987 Channel protein, hemolysin III family/putative Chemotaxis protein

Only 100 of 203 total aligned reads displayed.

CCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC  >  AE015451/5681297‑5681539
                                                                                                                       |                                                                                                                           
aggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgc                                                                                                                         <  1:4334957‑M2/5‑1 (MQ=255)
aggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgc                                                                                                                         <  2:4334959‑M2/5‑1 (MQ=255)
  gtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGctgctg                                                                                                                       <  1:4334963‑M2/7‑1 (MQ=255)
   tgggctgggttcctgtggtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCtgctgc                                                                                                                      <  2:4334966‑M2/8‑1 (MQ=255)
      gctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa                                                                                                                   <  2:4334970‑M2/11‑1 (MQ=255)
        tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa                                                                                                                   <  2:4334972‑M2/11‑1 (MQ=255)
        tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGc                                                                                                                 >  2:4335301‑M2/112‑124 (MQ=255)
         gggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGc                                                                                                                 <  1:4334973‑M2/13‑1 (MQ=255)
           gttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAg                                                                                                                  >  2:4335237‑M2/109‑120 (MQ=255)
            ttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc                                                                                                                >  2:4335182‑M2/108‑121 (MQ=255)
              cctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGccc                                                                                                               >  2:4335199‑M2/106‑120 (MQ=255)
               ctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa                                                                                                                   <  2:4334976‑M2/11‑1 (MQ=255)
                 gttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc                                                                                                                >  1:4335197‑M2/103‑116 (MQ=255)
                  ttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGa                                                                                                       <  2:4334980‑M2/23‑1 (MQ=255)
                     tgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGaca                                                                                                     >  1:4335156‑M2/99‑123 (MQ=255)
                        tgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAg                                                                                                 <  2:4334985‑M2/29‑1 (MQ=255)
                         gctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAt                                                                                                            >  2:4335154‑M2/95‑112 (MQ=255)
                         gctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAg                                                                                                 <  1:4334986‑M2/29‑1 (MQ=255)
                             atggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAgg                                                                                                <  1:4334990‑M2/30‑1 (MQ=255)
                             atggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGc                                                                                            <  2:4334991‑M2/34‑1 (MQ=255)
                                gcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccatgctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc                                                                                                                >  1:4335272‑M2/88‑101 (MQ=255)
                                 cttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTgcg                                                                                                                     >  1:4335257‑M2/87‑95 (MQ=255)
                                 cttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTcc                                                                                         >  1:4335288‑M2/87‑123 (MQ=255)
                                     gttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACCCAAGGCCGCTCCCACTc                                                                                    >  1:4335238‑M2/83‑124 (MQ=255)
                                     gttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc                                                                                    >  1:4335136‑M2/83‑124 (MQ=255)
                                     gttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCCCGACACAAGGCCGCTCCCACTc                                                                                    >  1:4335294‑M2/83‑124 (MQ=255)
                                        ctttgtgggagcggccttgtgtcgcgaaagggccgcgaaccgcccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTcc                                                                                   <  2:4334994‑M2/43‑1 (MQ=255)
                                         tttgtgggagcggccttgtgtcgccaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGa                                                                                >  1:4335282‑M2/79‑124 (MQ=255)
                                          ttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGac                                                                               <  1:4334996‑M2/47‑1 (MQ=255)
                                           tgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGac                                                                               >  2:4335247‑M2/77‑123 (MQ=255)
                                             tgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGaccac                                                                            >  2:4335293‑M2/75‑124 (MQ=255)
                                             tgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGaccac                                                                            <  2:4334999‑M2/50‑1 (MQ=255)
                                                 agcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAgg                                                                        >  2:4335253‑M2/71‑124 (MQ=255)
                                                 agcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAgg                                                                        <  1:4335001‑M2/54‑1 (MQ=255)
                                                     gccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGccc                                                                     <  2:4335002‑M2/57‑1 (MQ=255)
                                                     gccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaacagccgggGCtgctgc                                                                                                                      >  2:4335415‑M2/67‑74 (MQ=255)
                                                        ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcg                                                                 >  1:4335390‑M2/64‑124 (MQ=255)
                                                        ttgtgtcgcgaaaggggcgcgaagcagcctcagactttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcg                                                                 >  1:4335447‑M2/64‑124 (MQ=255)
                                                         tgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcgc                                                                >  1:4335264‑M2/63‑124 (MQ=255)
                                                           tgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTg                                                                   <  2:4335004‑M2/59‑1 (MQ=255)
                                                           tgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt                                                              >  2:4335128‑M2/61‑124 (MQ=255)
                                                           tgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt                                                              >  2:4335346‑M2/61‑124 (MQ=255)
                                                             tcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTc                                                             <  1:4335006‑M2/65‑1 (MQ=255)
                                                               gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTc                                                             >  2:4335261‑M2/57‑121 (MQ=255)
                                                                cgaaaggggcgcgaagcggccctaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTca                                                            <  1:4335010‑M2/66‑1 (MQ=255)
                                                                cgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcaca                                                          <  2:4335009‑M2/68‑1 (MQ=255)
                                                                cgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACAt                                                         >  2:4335307‑M2/56‑124 (MQ=255)
                                                                cgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACAt                                                         >  2:4335214‑M2/56‑124 (MQ=255)
                                                                  aaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACAt                                                         <  2:4335012‑M2/69‑1 (MQ=255)
                                                                     ggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc                                                                                    >  1:4335241‑M2/51‑92 (MQ=255)
                                                                      gggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAc                                                   <  2:4335014‑M2/75‑1 (MQ=255)
                                                                          gcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg                                               <  1:4335018‑M2/79‑1 (MQ=255)
                                                                          gcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg                                               <  1:4335016‑M2/79‑1 (MQ=255)
                                                                           cgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAcc                                                  >  1:4335504‑M2/45‑120 (MQ=255)
                                                                           cgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg                                               >  1:4335322‑M2/45‑123 (MQ=255)
                                                                            gaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg                                              <  2:4335020‑M2/80‑1 (MQ=255)
                                                                             aagcggccccaggctttcattgcccctgcatgaaccgccgggg                                                                                                                             >  1:4335340‑M2/43‑43 (MQ=255)
                                                                              agcggccccaggctttcattgccactccctagcccgccgggGCTGCTGCGCAGCACTATGGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcaca                                                          <  2:4335023‑M2/68‑1 (MQ=255)
                                                                                cggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg                                         <  2:4335026‑M2/85‑1 (MQ=255)
                                                                                cggccccaggcttccattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCaa                                                <  1:4335024‑M2/78‑1 (MQ=255)
                                                                                 ggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATc                                                        <  1:4335028‑M2/70‑1 (MQ=255)
                                                                                 ggccccaggctttaattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCt                                                              >  2:4335330‑M2/39‑102 (MQ=255)
                                                                                  gccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg                                         >  1:4335364‑M2/38‑122 (MQ=255)
                                                                                   ccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGt                                        <  1:4335031‑M2/86‑1 (MQ=255)
                                                                                       aggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAg                                          >  2:4335266‑M2/33‑116 (MQ=255)
                                                                                       aggctttcactgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc                                                                                    <  2:4335033‑M2/42‑1 (MQ=255)
                                                                                        ggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGCCCACCCGGCCCGGCGcc                                                               >  2:4335498‑M2/32‑94 (MQ=255)
                                                                                        ggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCCCCTCACATCCTAACCAAGGTCAgg                                         >  2:4335454‑M2/32‑116 (MQ=255)
                                                                                         gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc                                <  1:4335038‑M2/94‑1 (MQ=255)
                                                                                         gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc                                <  1:4335034‑M2/94‑1 (MQ=255)
                                                                                         gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc                                <  2:4335037‑M2/94‑1 (MQ=255)
                                                                                         gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATc                                <  2:4335040‑M2/94‑1 (MQ=255)
                                                                                          ctttcattgcccctgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTaa                                                    >  2:4335384‑M2/30‑103 (MQ=255)
                                                                                            ttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcgc                             <  2:4335043‑M2/97‑1 (MQ=255)
                                                                                            ttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcg                              >  1:4335313‑M2/28‑123 (MQ=255)
                                                                                              cattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGt                           <  2:4335045‑M2/99‑1 (MQ=255)
                                                                                              cattgccactgcaggaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCGCTCCAGACCACCAGGCCCTGCGCCACACATCCTAACCAAGGTCAGGTTGCAGATCcgc                             <  1:4335046‑M2/97‑1 (MQ=255)
                                                                                               attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGc                                     <  2:4335049‑M2/89‑1 (MQ=255)
                                                                                                   ccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACg                       >  1:4335331‑M2/21‑123 (MQ=255)
                                                                                                    cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGc                      <  2:4335052‑M2/104‑1 (MQ=255)
                                                                                                    cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCa                     >  1:4335298‑M2/20‑124 (MQ=255)
                                                                                                     actgcatgatccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAc                    <  1:4335053‑M2/106‑1 (MQ=255)
                                                                                                      ctgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAc                    >  2:4335223‑M2/18‑123 (MQ=255)
                                                                                                       tgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCa                  <  1:4335056‑M2/108‑1 (MQ=255)
                                                                                                       tgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCa                  <  2:4335057‑M2/108‑1 (MQ=255)
                                                                                                         catgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAc                    <  2:4335059‑M2/106‑1 (MQ=255)
                                                                                                          atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCGCCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGcc               <  1:4335060‑M2/111‑1 (MQ=255)
                                                                                                           tgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGc                >  2:4335274‑M2/13‑122 (MQ=255)
                                                                                                              accgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTc           >  2:4335528‑M2/10‑124 (MQ=255)
                                                                                                                cgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGGACCAGCCtt             <  1:4335077‑M2/113‑1 (MQ=255)
                                                                                                                cgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTc           <  1:4335073‑M2/115‑1 (MQ=255)
                                                                                                                 gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCttt            <  2:4335080‑M2/114‑1 (MQ=255)
                                                                                                                 gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCaa        >  2:4335318‑M2/7‑124 (MQ=255)
                                                                                                                 gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCaa        <  1:4335069‑M2/118‑1 (MQ=255)
                                                                                                                  ccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCaa        >  2:4335269‑M2/6‑123 (MQ=255)
                                                                                                                  ccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAt       <  2:4335068‑M2/119‑1 (MQ=255)
                                                                                                                    gggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGa                                  <  2:4335076‑M2/92‑1 (MQ=255)
                                                                                                                     ggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATg      <  1:4335081‑M2/120‑1 (MQ=255)
                                                                                                                      gGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGa   <  2:4335062‑M2/123‑1 (MQ=255)
                                                                                                                      gGCTGCTGCGCAGCACTATCGTGACACAATGTCGCTCCTACTCCAGGCCACCAGGCCCTGCGCCTCACATCCTAACCAAGGACAGGTTGCAGATCCACGTCAAGCACCAGCCTTTCAAAt       <  2:4335065‑M2/119‑1 (MQ=255)
                                                                                                                       |                                                                                                                           
CCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAC  >  AE015451/5681297‑5681539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.