New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2478409 =	39 (0.210)	4 (0.030)	3/184	17.5	13.0%	coding (106/444 nt)	PP_2172	conserved exported protein of unknown function
	?	AE015451	= 2478405	23 (0.160)					coding (102/444 nt)	PP_2172	conserved exported protein of unknown function
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAGCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGT  >  AE015451/2478290‑2478522                                                                                                                    |                                                                                                                      gAGCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTGGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtgg                                                                                                               <  2:1961297/124‑1 (MQ=255)  aGCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATTTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggt                                                                                                              >  1:1961354/1‑124 (MQ=255)  aGCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggt                                                                                                              >  1:1961321/1‑124 (MQ=255)   gCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCACGggtggtggtg                                                                                                             >  2:1961353/1‑124 (MQ=255)      gAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCTCCGATATCTCCCCGATCAGTTCCGCCTATGTCAAGggtggtggtgg                                                                                                            <  2:1961298/122‑1 (MQ=255)       aaCAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtg                                                                                                             >  2:1961372/1‑120 (MQ=255)        aCAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggt                                                                                                        <  2:1961299/124‑1 (MQ=255)          aaaaaaTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtg                                                                                                       >  1:1961402/1‑123 (MQ=255)           aaaaaTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtg                                                                                                       >  2:1961341/1‑122 (MQ=255)           aaaaaTGAAAAAACCTTTGATTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtgg                                                                                                      <  2:1961300/123‑1 (MQ=255)             aaaTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtgg                                                                                                   <  1:1961301/124‑1 (MQ=255)             aaaTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggt                                                                                                        >  1:1961397/1‑119 (MQ=255)              aaTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtggt                                                                                                  >  2:1961345/1‑124 (MQ=255)               aTGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtggtg                                                                                                 >  2:1961329/1‑124 (MQ=255)                    aaaaCCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtggtggtggt                                                                                            >  1:1961338/1‑124 (MQ=255)                            tGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTggtggcggtg                                                                                     >  1:1961380/1‑123 (MQ=255)                             ggTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtggcggtggcggtgg                                                                                       <  1:1961303/120‑7 (MQ=255)                                 gCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGggtggtggtggtggtggtggtggtgg                                                                                             <  2:1961304/110‑1 (MQ=255)                                   tGTCTTTGCTTGTGCATTGGCACTCGGGATGTCGGCATTCTGGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTggtggcggtggc                                                                                   >  1:1961358/1‑118 (MQ=255)                                   tGTCTTTGCTTGTGCATGGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGcggtggcggtgg                                                                              <  1:1961305/123‑1 (MQ=255)                                    gtttttGCTTGGGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTggtggcgg                                                                                       <  2:1961306/110‑1 (MQ=255)                                     tCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTggtggcggtggc                                                                                   <  1:1961307/116‑1 (MQ=255)                                                 cATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGaaa                                                               >  2:1961370/1‑124 (MQ=255)                                                     ggCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAg                                                                                                                       <  2:1961308/64‑1 (MQ=255)                                                       cACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGcggtggcggtgg                                                                                       >  2:1961381/1‑94 (MQ=255)                                                         cTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACgg                                                            >  2:1961391/1‑119 (MQ=255)                                                            gggATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACgg                                                            <  1:1961310/116‑1 (MQ=255)                                                            gggATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAG‑‑‑GGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATg                                                 >  1:1961336/1‑124 (MQ=255)                                                                           ttGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTgg                                          >  1:1961374/1‑119 (MQ=255)                                                                             gCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAG‑‑‑‑‑‑‑‑‑GGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCAt                                       <  2:1961311/111‑1 (MQ=255)                                                                               ccgccgATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGc                                                         >  2:1961396/1‑100 (MQ=255)                                                                               ccgccgATATCTCCCCGATCAGTTCCGCCTATGCCAAG‑‑‑‑‑‑‑‑‑GGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAggg                                <  2:1961312/116‑1 (MQ=255)                                                                                     atatCTCCCCGATCAGTTCCGCCTATGCCAAGGgtggtggtggtggtggtggtggtggtg                                                                                           <  1:1961314/60‑1 (MQ=255)                                                                                     atatCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACAt                                                  <  2:1961315/101‑1 (MQ=255)                                                                                     atatCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATgg                                                <  1:1961313/103‑1 (MQ=255)                                                                                          tcCCCGATCAGTTCCGCCTATGCCAAG‑‑‑GGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACg                                                             >  2:1961548/1‑82 (MQ=38)                                                                                            cccGATCAGTTCCGCCTATGCCAAGGGGGGTGGTGGTGGTGGTGGTGGTGGCGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATggg                                    <  1:1961316/108‑1 (MQ=255)                                                                                                 tCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGaa               >  1:1961368/1‑124 (MQ=255)                                                                                                          ccTAGGCCAAGGGGGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTgg      <  1:1961318/124‑1 (MQ=255)                                                                                                                ccAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGt  >  1:1961371/1‑122 (MQ=255)                                                                                                                 cAAGGGGGGTGGTGGTGGTGGGGGTGGTGGtggcggtggcgg                                                                                 <  2:1961319/42‑1 (MQ=18)                                                                                                                  aaGGGTGGGGGGGGTGGGGGTGGGGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCt         <  2:1961320/113‑1 (MQ=255)                                                                                                                    |                                                                                                                      GAGCCGAACAAAAAATGAAAAAACCTTTGGTTGCTGTCTTTGCTTGTGCATTGGCACTCGGGATGACGGCATTCTTGCCCGCCGATATCTCCCCGATCAGTTCCGCCTATGCCAAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTCATGGCGGTGGAAACGGTGCCGGACATGGCGGTGGCATGGGAGGGCATAGTGGAAGCGGGAAGGGCCTTGGAAGT  >  AE015451/2478290‑2478522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.