New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AC_000091 3748316 =12 (0.090)163 (1.220) 108/178 0.0 93.1% coding (665/984 nt) tnaB tryptophan transporter of low affinity
?AC_000091 = 4056987 NA (NA)coding (388/414 nt) yrhA hypothetical protein

Only 100 of 163 total aligned reads displayed.

CCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AC_000091/3748404‑3748316
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT  <  AC_000091/4056987‑4056899
                                                                                                                                                                                  
CCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGG                                                                                          >  2:2771976/1‑90
 CGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGG                                                                                         >  2:2679003/1‑90
 CGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGG                                                                                         <  1:631720/90‑1
  GTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGT                                                                                        <  1:2997065/90‑1
   TATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTG                                                                                       <  1:2939976/90‑1
    ATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGA                                                                                      <  1:2781514/90‑1
     TATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGAT                                                                                     <  2:1575952/90‑1
     TATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGAT                                                                                     <  2:3436465/90‑1
     TATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGAT                                                                                     <  1:1383867/90‑1
     TATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGAT                                                                                     <  1:1634633/90‑1
           TATGGCTTTTCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCC                                                                               <  2:1098843/90‑1
           TATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCC                                                                               >  1:3470108/1‑90
             TGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAA                                                                             <  2:2386254/90‑1
             TGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAA                                                                             <  1:1928326/90‑1
              GGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAAC                                                                            >  1:27054/1‑90
                CTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTT                                                                          <  1:3440062/90‑1
                 TTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTA                                                                         <  1:1507109/90‑1
                 TTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTA                                                                         <  1:2629677/90‑1
                  TTGCCGGTGTGTCTGGCGTCATTTGATTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTAC                                                                        <  2:1009922/90‑1
                   TGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACT                                                                       <  1:777337/90‑1
                      CGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTTCCAACTTACTGAT                                                                    <  2:3444438/90‑1
                       GGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATT                                                                   <  2:1002417/90‑1
                       GGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATT                                                                   >  1:2946437/1‑90
                        GTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTT                                                                  <  2:589048/90‑1
                        GTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTT                                                                  <  2:2087820/90‑1
                         TGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTA                                                                 <  1:2670009/90‑1
                          GTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAG                                                                >  1:1066531/1‑90
                          GTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAG                                                                <  2:2503166/90‑1
                           TGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGT                                                               >  1:3187952/1‑90
                            GTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTG                                                              <  1:2441186/90‑1
                              CTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                            <  2:1606900/90‑1
                              CTGGCGTCATTTGGTTTCCACGGCAATATGCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                            >  2:1170325/1‑90
                                GGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                          <  1:1449393/90‑1
                                  CGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                        >  1:1744135/1‑90
                                    TCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                      <  2:796089/90‑1
                                     CATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                     <  2:3178460/90‑1
                                      ATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                    >  1:1783540/1‑90
                                      ATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                    >  2:2501946/1‑90
                                      ATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                    >  1:970124/1‑90
                                       TTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT                                                   >  1:2292016/1‑90
                                       TTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT                                                   >  2:3153029/1‑90
                                         TGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                 <  2:13735/90‑1
                                         TGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                 <  1:986641/90‑1
                                           GTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                               <  1:2321866/90‑1
                                            TTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTGTTG                                              <  2:2262325/90‑1
                                             TTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                             <  2:466034/90‑1
                                             TTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                             <  2:847419/90‑1
                                              TCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                            <  2:1103009/90‑1
                                              TCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                            <  1:1004874/90‑1
                                              TCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                            >  1:2520805/1‑90
                                              TCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                            <  1:1897639/90‑1
                                               CCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                           >  2:1361657/1‑90
                                                  CGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                        >  2:1674098/1‑90
                                                  CGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                        <  2:738290/90‑1
                                                   GGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT                                       <  2:514731/90‑1
                                                      AATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                    >  2:1045035/1‑90
                                                      AATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                    >  1:2954763/1‑90
                                                      AATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTCAGTGTATGATGGTGTTTCTGAGGTGCTCCA                                    <  2:648881/90‑1
                                                       ATATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                   <  2:726539/90‑1
                                                         ATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                 <  2:262324/90‑1
                                                         ATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                 >  2:3293367/1‑90
                                                         ATTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                 >  2:491504/1‑90
                                                          TTCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                                >  1:1045982/1‑90
                                                           TCCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                               >  2:1931156/1‑90
                                                            CCCATCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                              >  1:424490/1‑90
                                                            CCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                              >  1:3074202/1‑90
                                                            CCCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                              <  1:2555112/90‑1
                                                             ccgGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                             >  1:1207134/4‑90
                                                             CCAGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                             <  1:1174247/90‑1
                                                               AGCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT                           >  2:94128/1‑90
                                                                GCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                          <  1:1861511/90‑1
                                                                GCCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                          <  1:1334437/90‑1
                                                                 CCTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                         <  2:785570/90‑1
                                                                  CTGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                        >  2:562546/1‑90
                                                                   TGATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                       >  1:119982/1‑90
                                                                    GATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                      >  1:1559039/1‑90
                                                                     ATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                     <  1:405926/90‑1
                                                                     ATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                     >  1:2814500/1‑90
                                                                     ATTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                     >  1:2290711/1‑90
                                                                      TTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                    >  2:291324/1‑90
                                                                      TTATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                    >  1:1683635/1‑90
                                                                       TATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTTATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                   <  2:1356057/90‑1
                                                                       TATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                   >  1:2456167/1‑90
                                                                        ATTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                  <  1:612658/90‑1
                                                                         TTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                 <  2:2936759/90‑1
                                                                         TTTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                 >  1:566173/1‑90
                                                                          TTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                <  2:838676/90‑1
                                                                          TTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                >  2:1245724/1‑90
                                                                          TTGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                <  2:413611/90‑1
                                                                           TGCTATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC               >  1:1006808/1‑90
                                                                              TATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT            <  2:3186147/90‑1
                                                                              TATGGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT            >  2:2331664/1‑90
                                                                                 GGAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC         >  2:541131/1‑90
                                                                                  GAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT        >  2:408566/1‑90
                                                                                  GAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT        >  1:1404023/1‑90
                                                                                  GAAAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT        >  2:89325/1‑90
                                                                                    AAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC      >  1:140101/1‑90
                                                                                    AAACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC      >  1:941840/1‑90
                                                                                     AACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTTCCTCCT     >  2:2008703/1‑90
                                                                                     AACGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT     <  1:2893672/90‑1
                                                                                                                                                                                  
CCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AC_000091/3748404‑3748316
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT  <  AC_000091/4056987‑4056899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.