| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AC_000091 | = 2176982 | 0 (0.000) | 119 (0.940) | 82/168 | 0.4 | 100% | coding (71/321 nt) | gatA | galactitol‑specific enzyme IIA component of PTS |
| ? | AC_000091 | 2178182 = | 0 (0.000) | coding (202/315 nt) | gatA | galactitol‑specific enzyme IIA component of PTS | |||||
Only 100 of 131 total aligned reads displayed.
CCAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > AC_000091/2176893‑2177069 | ccAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAG > 2:370899‑M1/1‑90 (MQ=255)ccAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAG < 2:231813‑M1/90‑1 (MQ=255)ccAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAG < 2:237507‑M1/90‑1 (MQ=255) cAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGc < 1:1871268‑M1/90‑2 (MQ=255) aaCGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGca > 2:103953‑M1/1‑88 (MQ=255) aCGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcat < 1:1051796‑M1/90‑4 (MQ=255) aCGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcat > 2:476974‑M1/1‑87 (MQ=255) cGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatg < 1:730980‑M1/90‑5 (MQ=255) cGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatg < 1:1396461‑M1/90‑5 (MQ=255) aTACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaa < 1:200091‑M1/90‑7 (MQ=255) aTACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaa > 1:1799204‑M1/1‑84 (MQ=255) ccGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGTCGACTTAGcatgaatcg < 2:3350612‑M1/90‑10 (MQ=255) gCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcc < 2:1180649‑M1/90‑12 (MQ=255) aCGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctca < 1:773716‑M1/90‑15 (MQ=255) aCGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctca < 2:3440404‑M1/90‑15 (MQ=255) cgtcgtTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcac > 2:894377‑M1/1‑75 (MQ=255) gtcgtTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcaca > 1:303877‑M1/1‑74 (MQ=255) ttATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgc < 1:1557917‑M1/90‑21 (MQ=255) ttATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgc < 1:1409400‑M1/90‑21 (MQ=255) ttATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgc > 2:2067209‑M1/1‑70 (MQ=255) catcatcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggta > 1:685590‑M1/1‑66 (MQ=255) catcatcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggta > 1:1813499‑M1/1‑66 (MQ=255) atcatcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtat < 1:2224031‑M1/90‑26 (MQ=255) atcatcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtat < 1:1026918‑M1/90‑26 (MQ=255) catcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggaattg > 2:2982845‑M1/1‑63 (MQ=255) atcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgc > 1:1429101‑M1/1‑62 (MQ=255) tcCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgca < 1:3036202‑M1/90‑30 (MQ=255) cGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaat > 2:2680776‑M1/1‑59 (MQ=255) cTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatag < 1:61110‑M1/90‑34 (MQ=255) cTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatag < 2:1916759‑M1/90‑34 (MQ=255) cTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCCGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatag < 2:2671681‑M1/90‑34 (MQ=255) ttGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagc > 2:3094109‑M1/1‑56 (MQ=255) tGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtcttgcaatagcg < 1:1480107‑M1/90‑36 (MQ=255) tGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcg < 1:3343695‑M1/90‑36 (MQ=255) tGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcg > 2:1945173‑M1/1‑55 (MQ=255) gCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgt > 2:206098‑M1/1‑54 (MQ=255) gCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgt < 2:1129212‑M1/90‑37 (MQ=255) tGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGCCTGACGACTTAGcatgaatcgcctcccaatgcggtattgcaatagcgtgc < 1:2706140‑M1/90‑39 (MQ=255) aaaaTGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctg < 2:3152879‑M1/90‑41 (MQ=255) aaaTGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgc > 2:2331553‑M1/1‑49 (MQ=255) tGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctca > 2:1505579‑M1/1‑46 (MQ=255) aaCTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGAATTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaag > 2:1313308‑M1/1‑44 (MQ=255) aCTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagc > 2:595179‑M1/1‑43 (MQ=255) cTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagca < 2:730997‑M1/90‑49 (MQ=255) cTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagca < 2:2461892‑M1/90‑49 (MQ=255) tttATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcat < 1:2391949‑M1/90‑50 (MQ=255) tttATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcat < 2:299003‑M1/90‑50 (MQ=255) ttATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcatt > 1:3087911‑M1/1‑40 (MQ=255) ttATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcatt > 1:2209624‑M1/1‑40 (MQ=255) ttATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcatt < 2:529051‑M1/90‑51 (MQ=255) tATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcatta < 1:2401461‑M1/90‑52 (MQ=255) aTTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattat < 2:1360372‑M1/90‑53 (MQ=255) aTTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgccgtattgcaatagcgtgctgctcaagcattat > 1:2215782‑M1/1‑38 (MQ=255) tttGTTGGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatc > 2:3279111‑M1/1‑37 (MQ=255) tgttgGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatccc > 1:3409885‑M1/1‑35 (MQ=255) gttgGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccg > 1:1101734‑M1/1‑34 (MQ=255) tgGCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggt < 2:2155148‑M1/90‑59 (MQ=255) ggCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggta < 2:3393914‑M1/90‑60 (MQ=255) gCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtag < 1:2040542‑M1/90‑61 (MQ=255) gCCTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtag > 2:1629551‑M1/1‑30 (MQ=255) ccTTAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagg < 1:1207988‑M1/90‑62 (MQ=255) ttAACAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtaggga < 1:3157550‑M1/90‑64 (MQ=255) aaCAGATAAATGGCTGACGAGTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaat > 1:198694‑M1/1‑25 (MQ=255) aCAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaatt > 1:2858350‑M1/1‑24 (MQ=255) aCAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaatt < 2:294375‑M1/90‑67 (MQ=255) aCAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaatt > 2:3444497‑M1/1‑24 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc > 1:2290146‑M1/1‑23 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc > 1:1176891‑M1/1‑23 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc < 1:676860‑M1/90‑68 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc > 2:337518‑M1/1‑23 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc > 2:261548‑M1/1‑23 (MQ=255) cAGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattc > 2:2762496‑M1/1‑23 (MQ=255) aGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattct > 1:1474329‑M1/1‑22 (MQ=255) aGATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattct < 1:465764‑M1/90‑69 (MQ=255) gATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctg < 1:1123004‑M1/90‑70 (MQ=255) gATAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctg > 2:2777989‑M1/1‑21 (MQ=255) aTAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgc > 1:1284641‑M1/1‑20 (MQ=255) tAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgct > 2:1966970‑M1/1‑19 (MQ=255) tAAATGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgct > 1:525349‑M1/1‑19 (MQ=255) aaaTGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgctt < 1:2515124‑M1/90‑73 (MQ=255) aTGGCTGACGACTTAGcatgaatcgcctcagaatgcggtattgcaatagcgtgctgctcaagcattatcccggcagggaattttgcttct > 2:2811354‑M1/1‑16 (MQ=255) aTGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttct > 2:913350‑M1/1‑16 (MQ=255) tGGCTGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctc < 1:2847833‑M1/90‑76 (MQ=255) gCTAACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgcccaagcattatcccggtagggaattctgcttctctg < 1:3042410‑M1/90‑78 (MQ=255) tGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggc < 1:2608494‑M1/90‑80 (MQ=255) tGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggc > 2:1513368‑M1/1‑11 (MQ=255) tGACGACTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggc > 2:1499028‑M1/1‑11 (MQ=255) gacgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggca > 2:907405‑M1/1‑10 (MQ=255) gacgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggca > 1:1796256‑M1/1‑10 (MQ=255) gacgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggca < 2:950540‑M1/90‑81 (MQ=255) acgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaa > 2:1415000‑M1/1‑9 (MQ=255) acgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaa > 2:1885994‑M1/1‑9 (MQ=255) cgacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatccctgtagggaattctgcttctctggcaat < 1:2477001‑M1/90‑83 (MQ=255) gacTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaatt > 1:840184‑M1/1‑7 (MQ=255) cTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaa < 2:1275339‑M1/90‑86 (MQ=255) cTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaa < 2:3301051‑M1/90‑86 (MQ=255) cTTAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaa < 2:491520‑M1/90‑86 (MQ=255) ttAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaat < 1:2298975‑M1/90‑87 (MQ=255) ttAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaat < 1:3065245‑M1/90‑87 (MQ=255) tAGcatgaatcgcctcacaatgcggtattgcaatagcgtgctgctcaagcattatcccggtagggaattctgcttctctggcaattaatg < 2:201647‑M1/90‑88 (MQ=255) | CCAACGATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > AC_000091/2176893‑2177069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |