| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AC_000091 | = 2176982 | 0 (0.000) | 119 (0.940) | 82/168 | 0.4 | 100% | coding (71/321 nt) | gatA | galactitol‑specific enzyme IIA component of PTS |
| ? | AC_000091 | 2178182 = | 0 (0.000) | coding (202/315 nt) | gatA | galactitol‑specific enzyme IIA component of PTS | |||||
Only 100 of 130 total aligned reads displayed.
ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCT > AC_000091/2178094‑2178271 | aacgataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCa > 2:103953‑M2/89‑90 (MQ=255) acgataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCAt < 1:1051796‑M2/3‑1 (MQ=255) acgataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCAt > 2:476974‑M2/88‑90 (MQ=255) cgataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATg < 1:1396461‑M2/4‑1 (MQ=255) cgataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATg < 1:730980‑M2/4‑1 (MQ=255) ataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGaa < 1:200091‑M2/6‑1 (MQ=255) ataccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGaa > 1:1799204‑M2/85‑90 (MQ=255) accgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATc > 1:1359245‑M2/83‑90 (MQ=255) ccgccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgtcgacttagCATGAATCg < 2:3350612‑M2/9‑1 (MQ=255) gccacgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGcc > 2:2885324‑M2/80‑90 (MQ=255) acgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTca < 2:3440404‑M2/14‑1 (MQ=255) cgtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTcac > 2:894377‑M2/76‑90 (MQ=255) gtcgttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTcaca > 1:303877‑M2/75‑90 (MQ=255) ttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGc < 1:1557917‑M2/20‑1 (MQ=255) ttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGc < 1:1409400‑M2/20‑1 (MQ=255) ttatcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGc > 2:2067209‑M2/71‑90 (MQ=255) atcatcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCgg > 1:2108463‑M2/69‑90 (MQ=255) catcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTa > 1:1813499‑M2/67‑90 (MQ=255) atcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTAt < 1:2224031‑M2/25‑1 (MQ=255) atcatccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTAt < 1:1026918‑M2/25‑1 (MQ=255) tccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCa > 2:1392550‑M2/62‑90 (MQ=255) tccgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCa < 1:3036202‑M2/29‑1 (MQ=255) cgcttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAAt > 2:2680776‑M2/60‑90 (MQ=255) cttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAg < 1:61110‑M2/33‑1 (MQ=255) cttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAg < 2:1916759‑M2/33‑1 (MQ=255) cttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAg < 2:461895‑M2/33‑1 (MQ=255) ttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGc > 2:3094109‑M2/57‑90 (MQ=255) ttgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGc > 1:1142170‑M2/57‑90 (MQ=255) tgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTCTTGCAATAGCg < 1:1480107‑M2/35‑1 (MQ=255) tgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCg > 2:1945173‑M2/56‑90 (MQ=255) tgctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCg < 1:3343695‑M2/35‑1 (MQ=255) gctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGt < 2:1129212‑M2/36‑1 (MQ=255) gctgaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGt > 2:206098‑M2/55‑90 (MQ=255) tgaaaatgaactttatttgttggccttaacagataaatgcctgacgacttagCATGAATCGCCTCCCAATGCGGTATTGCAATAGCGtgc < 1:2706140‑M2/38‑1 (MQ=255) gaaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGtgct < 1:2398394‑M2/39‑1 (MQ=255) aaaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGtgctg < 2:3152879‑M2/40‑1 (MQ=255) aaatgaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGtgctgc > 2:2331553‑M2/50‑90 (MQ=255) gaactttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCaa < 2:3027594‑M2/45‑1 (MQ=255) aactttatttgttggccttaacagataaatggctgacgaattagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAg > 2:1313308‑M2/45‑90 (MQ=255) actttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGc > 2:595179‑M2/44‑90 (MQ=255) actttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGc > 1:1952320‑M2/44‑90 (MQ=255) ctttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCa < 2:2461892‑M2/48‑1 (MQ=255) ctttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCa < 2:730997‑M2/48‑1 (MQ=255) tttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCAt < 1:2391949‑M2/49‑1 (MQ=255) tttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCAt < 2:299003‑M2/49‑1 (MQ=255) ttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCAtt > 1:2209624‑M2/41‑90 (MQ=255) ttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCAtt > 1:3087911‑M2/41‑90 (MQ=255) ttatttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCAtt < 2:529051‑M2/50‑1 (MQ=255) atttgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCCGTATTGCAATAGCGTGCTGCTCAAGCATTAt > 1:2215782‑M2/39‑90 (MQ=255) tgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATccc < 2:1246119‑M2/55‑1 (MQ=255) tgttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATccc > 1:3409885‑M2/36‑90 (MQ=255) gttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCg > 2:3283109‑M2/35‑90 (MQ=255) gttggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCg > 1:1101734‑M2/35‑90 (MQ=255) tggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGt < 2:2155148‑M2/58‑1 (MQ=255) ggccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTa < 2:3393914‑M2/59‑1 (MQ=255) gccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg > 2:1629551‑M2/31‑90 (MQ=255) ccttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAgg < 1:1207988‑M2/61‑1 (MQ=255) ttaacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGa < 1:3157550‑M2/63‑1 (MQ=255) aacagataaatggctgacgagttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAt > 1:198694‑M2/26‑90 (MQ=255) aacagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAt > 1:846074‑M2/26‑90 (MQ=255) acagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAtt > 1:2858350‑M2/25‑90 (MQ=255) acagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAtt < 2:294375‑M2/66‑1 (MQ=255) cagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc > 2:2762496‑M2/24‑90 (MQ=255) cagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc < 1:69040‑M2/67‑1 (MQ=255) cagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc > 2:261548‑M2/24‑90 (MQ=255) cagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc < 1:676860‑M2/67‑1 (MQ=255) cagataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc > 1:1176891‑M2/24‑90 (MQ=255) agataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCt > 1:1474329‑M2/23‑90 (MQ=255) agataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCt < 2:2409836‑M2/68‑1 (MQ=255) agataaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCt < 1:465764‑M2/68‑1 (MQ=255) taaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCt > 1:525349‑M2/20‑90 (MQ=255) taaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCt > 2:1966970‑M2/20‑90 (MQ=255) aaatggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCtt < 1:2515124‑M2/72‑1 (MQ=255) atggctgacgacttagCATGAATCGCCTCAGAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGCAGGGAATTTTGCTtct > 2:2811354‑M2/17‑90 (MQ=255) atggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtct > 2:913350‑M2/17‑90 (MQ=255) tggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtctc < 1:2847833‑M2/75‑1 (MQ=255) ggctgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTctct > 2:2744627‑M2/15‑90 (MQ=255) gctaacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCCCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTg < 1:3042410‑M2/77‑1 (MQ=255) tgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGc > 2:3424360‑M2/12‑90 (MQ=255) tgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGc > 2:1513368‑M2/12‑90 (MQ=255) tgacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGc > 2:1499028‑M2/12‑90 (MQ=255) gacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa > 2:907405‑M2/11‑90 (MQ=255) gacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa < 2:950540‑M2/80‑1 (MQ=255) gacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa > 1:1796256‑M2/11‑90 (MQ=255) gacgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa < 1:2621913‑M2/80‑1 (MQ=255) acgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCaa > 2:1885994‑M2/10‑90 (MQ=255) acgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCaa > 2:1415000‑M2/10‑90 (MQ=255) cgacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCTGTAGGGAATTCTGCTTCTCTGGCAAt < 1:2477001‑M2/82‑1 (MQ=255) gacttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAAtt > 1:840184‑M2/8‑90 (MQ=255) cttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTaa < 2:3301051‑M2/85‑1 (MQ=255) cttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTaa < 2:1275339‑M2/85‑1 (MQ=255) cttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTaa < 2:491520‑M2/85‑1 (MQ=255) ttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt < 1:3065245‑M2/86‑1 (MQ=255) ttagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt < 1:2298975‑M2/86‑1 (MQ=255) tagCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg < 2:201647‑M2/87‑1 (MQ=255) agCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGc < 1:1449886‑M2/88‑1 (MQ=255) cATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt > 1:2478816/1‑90 (MQ=255) cATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt < 1:383269/90‑1 (MQ=255) cATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt > 1:702322/1‑90 (MQ=255) cATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt > 1:1115927/1‑90 (MQ=255) | ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCT > AC_000091/2178094‑2178271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |