| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AC_000091 | = 3746910 | 0 (0.000) | 117 (0.920) | 86/170 | 0.3 | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | AC_000091 | 3748110 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
Only 100 of 128 total aligned reads displayed.
TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGA > AC_000091/3748021‑3748199 | gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga < 2:682470‑M2/1‑1 (MQ=255)gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 2:2473828‑M2/90‑90 (MQ=255)gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:1907086‑M2/90‑90 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag > 1:2952109‑M2/89‑90 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag < 2:1969860‑M2/2‑1 (MQ=255) gggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagaga > 2:269566‑M2/88‑90 (MQ=255) gggagttatcaatcttaaacagggccgccagataatcgaacaaccccagcgtgacaccaacgaacgaactggcagccgcaaagtaagaga > 2:1447145‑M2/88‑90 (MQ=255) ggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:3298945‑M2/87‑90 (MQ=255) ggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa < 1:887594‑M2/4‑1 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAac < 2:3431855‑M2/5‑1 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac < 1:1368383‑M2/7‑1 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac < 1:3182965‑M2/7‑1 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac > 1:1970901‑M2/84‑90 (MQ=255) ttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACAcc > 1:3068621‑M2/83‑90 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 2:1774247‑M2/9‑1 (MQ=255) atcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag < 1:2578319‑M2/10‑1 (MQ=255) atcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaaagaactggcaacagctaagttagAGAACACcag < 2:435108‑M2/10‑1 (MQ=255) aatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:3468540‑M2/78‑90 (MQ=255) aatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag < 2:2867977‑M2/13‑1 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 2:2073878‑M2/77‑90 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg < 1:3482199‑M2/14‑1 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:670114‑M2/77‑90 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 2:3088003‑M2/16‑1 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 2:1681816‑M2/16‑1 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaacttgcaacagctaagttagAGAACACCAGCAGGCaa > 1:3383936‑M2/74‑90 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaa < 1:2737222‑M2/18‑1 (MQ=255) aaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 2:2669896‑M2/72‑90 (MQ=255) aaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 1:1260066‑M2/72‑90 (MQ=255) aaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 2:798697‑M2/72‑90 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc < 1:2916632‑M2/20‑1 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:2184535‑M2/71‑90 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc < 1:1479056‑M2/20‑1 (MQ=255) acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACt < 1:2505290‑M2/21‑1 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:672459‑M2/69‑90 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:1024907‑M2/22‑1 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:1444644‑M2/69‑90 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 2:3115526‑M2/22‑1 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:1496474‑M2/22‑1 (MQ=255) gtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGAt < 2:1589905‑M2/25‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg < 2:3298386‑M2/29‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg > 2:1497990‑M2/62‑90 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg < 1:2890879‑M2/29‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg > 1:2741230‑M2/62‑90 (MQ=255) ccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGc < 1:2535587‑M2/30‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 2:2937260‑M2/31‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc > 2:2513988‑M2/60‑90 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc > 2:2549267‑M2/60‑90 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg < 1:726580‑M2/32‑1 (MQ=255) agataagcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg > 2:715229‑M2/59‑90 (MQ=255) ataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 2:1444428‑M2/34‑1 (MQ=255) taatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:1087702‑M2/56‑90 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCt < 1:2028341‑M2/36‑1 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGAAAAACTCGGTAATGCCGTGCt > 2:1646200‑M2/55‑90 (MQ=255) cgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt < 2:927572‑M2/39‑1 (MQ=255) gaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt < 1:125719‑M2/40‑1 (MQ=255) aacaaccccagcgtgacaccaaagaacgaactggaaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCAGTTTg > 2:2997430‑M2/50‑90 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt < 2:875996‑M2/43‑1 (MQ=255) ccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa > 2:2098855‑M2/43‑90 (MQ=255) ccagcgtgacaccaaagaaagaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa < 1:623700‑M2/48‑1 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAgg > 1:1692079‑M2/41‑90 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGa < 2:1229‑M2/51‑1 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCTTGCTGTTTGGTGCCGAGGaa < 2:494180‑M2/52‑1 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGaa > 2:3222368‑M2/39‑90 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGaa > 1:1704986‑M2/39‑90 (MQ=255) acaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAt > 1:523067‑M2/35‑90 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTc > 1:1768614‑M2/32‑90 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGATGTTTGGTGCCGAGGAACGATTTc > 2:337837‑M2/32‑90 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa < 1:3352844‑M2/60‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa > 2:1621167‑M2/31‑90 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc < 2:685917‑M2/61‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGTCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc > 2:1065998‑M2/29‑90 (MQ=255) agaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa > 2:293411‑M2/28‑90 (MQ=255) gaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg < 2:2098580‑M2/64‑1 (MQ=255) gaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg < 1:2216773‑M2/64‑1 (MQ=255) gaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg > 1:168800‑M2/27‑90 (MQ=255) actggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc < 1:2563842‑M2/70‑1 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCaa > 1:2132378‑M2/19‑90 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAtaaag > 1:73716‑M2/18‑89 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGAAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc < 1:1751987‑M2/73‑1 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGt < 2:2233098‑M2/75‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt > 2:2216632‑M2/15‑90 (MQ=255) cagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgc > 2:2963150‑M2/13‑90 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc < 1:855502‑M2/79‑1 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc < 2:648400‑M2/79‑1 (MQ=255) ctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgc > 2:1329775‑M2/10‑90 (MQ=255) ctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgc > 1:1890143‑M2/10‑90 (MQ=255) taagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgcc > 2:2728020‑M2/9‑90 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCt < 1:2258502‑M2/83‑1 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAGCAGCGAATCAACGTTGCCGCCTg > 2:1163091‑M2/7‑90 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTg > 2:2297540‑M2/7‑90 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCCGCGAATCAACGTTGCCGCCTgag > 2:1412693‑M2/5‑90 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag > 1:2833238‑M2/5‑90 (MQ=255) tagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagg < 1:2818940‑M2/87‑1 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga > 1:2054573‑M2/3‑90 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga < 2:447485‑M2/88‑1 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga < 1:333272‑M2/88‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgaggag > 1:2521497‑M2/2‑90 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgaggag < 1:705340‑M2/89‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgaggag < 2:125378‑M2/89‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGgaga > 1:415867/1‑90 (MQ=255) | TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGA > AC_000091/3748021‑3748199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |