Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AC_000091	3690506–3690766	3693239–3692694	1929–2734	70 [68]	[67] 72	[rrlC]–[gltU]	[rrlC],[gltU]

CCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAA  >  AC_000091/3693196‑3693329                                             |                                                                                          ccTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGGCGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTc                                              >  2:1540346/1‑90 (MQ=14) ccTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCAcctt                                              <  2:539195/90‑4 (MQ=1) ccTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTc                                              <  2:2023637/90‑1 (MQ=31)  cTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTcc                                             >  2:928089/1‑90 (MQ=32)     ttACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTTCTTCGCAAGACGCCTTGCTTTTCACTTCCTAt                                          <  1:1503589/90‑1 (MQ=18)     ttACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTAt                                          >  1:3261816/1‑90 (MQ=33)     ttACCGCCGTGAAAGGGCGGAGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTAt                                          >  2:2534344/1‑90 (MQ=18)        ccgccgTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAg                                       <  2:503057/90‑1 (MQ=33)         cgccgTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGa                                      <  1:2328123/90‑1 (MQ=33)          gccgTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGAc                                     <  2:2212064/90‑1 (MQ=33)           ccgTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACa                                    >  1:2772306/1‑90 (MQ=33)             gTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAAt                                  <  1:3090907/90‑1 (MQ=33)             gTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAAt                                  <  2:3429352/90‑1 (MQ=33)             gTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAAt                                  <  2:2103740/90‑1 (MQ=33)                aaaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtg                               >  2:1704834/1‑90 (MQ=33)                aaaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtg                               >  2:2629257/1‑90 (MQ=33)                 aaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgt                              <  1:446652/90‑1 (MQ=35)                 aaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgt                              <  1:217777/90‑1 (MQ=35)                 aaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgt                              >  1:196521/1‑90 (MQ=33)                 aaGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgt                              >  1:962505/1‑90 (MQ=33)                  aGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgtg                             <  1:915713/90‑1 (MQ=35)                  aGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgtg                             >  2:1185572/1‑90 (MQ=33)                   gggCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgtgt                            <  2:1686760/90‑1 (MQ=35)                   gggCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgtgt                            <  1:2805612/90‑1 (MQ=33)                    ggCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCtgtgtg                           >  1:1550619/1‑90 (MQ=33)                      cGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAg                         <  1:184753/90‑1 (MQ=35)                       ggTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGc                        >  2:2057572/1‑90 (MQ=33)                       ggTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGc                        <  2:402075/90‑1 (MQ=33)                       ggTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGc                        >  2:604428/1‑90 (MQ=33)                       ggTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGc                        >  2:1458889/1‑90 (MQ=33)                          gtCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACt                     <  2:2031476/90‑1 (MQ=35)                          gtCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACt                     <  2:2241118/90‑1 (MQ=35)                          gtCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACt                     <  2:997622/90‑1 (MQ=35)                          gtCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACt                     <  2:463539/90‑1 (MQ=35)                           tCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTg                    <  2:2856602/90‑1 (MQ=35)                           tCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTg                    <  1:558877/90‑1 (MQ=35)                           tCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTg                    <  1:1113197/90‑1 (MQ=33)                            ccTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGc                   <  2:1359748/90‑1 (MQ=33)                            ccTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGc                   <  1:510027/90‑1 (MQ=33)                            ccTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGc                   >  2:579017/1‑90 (MQ=33)                            ccTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGc                   <  2:800022/90‑1 (MQ=35)                             cTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCa                  <  1:1314787/90‑1 (MQ=35)                              tGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCaa                 <  2:551181/90‑1 (MQ=33)                              tGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCaa                 <  1:1343372/90‑1 (MQ=33)                               gggCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCaaa                >  1:1437676/1‑90 (MQ=33)                                ggCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAg               >  1:549462/1‑90 (MQ=33)                                ggCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAg               <  1:105189/90‑1 (MQ=35)                                ggCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAg               >  1:1521706/1‑90 (MQ=33)                                 gCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGAGTGAGCACTGCAAAGa              >  1:2539809/1‑90 (MQ=18)                                  ccTCTAGCCGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGaa             >  2:1754922/1‑90 (MQ=18)                                  ccTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGaa             <  1:2899962/90‑1 (MQ=35)                                   ctctAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAAc            <  1:252973/90‑1 (MQ=35)                                   ctctAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAAc            <  2:2651621/90‑1 (MQ=35)                                    tctAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACg           >  2:1352378/1‑90 (MQ=33)                                     ctAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGc          >  2:264326/1‑90 (MQ=33)                                       aGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGctt        <  2:2002910/90‑1 (MQ=35)                                       aGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGctt        <  2:1722584/90‑1 (MQ=35)                                       aGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGctt        >  2:667150/1‑90 (MQ=33)                                        gACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGcttc       <  2:2670134/90‑1 (MQ=35)                                          cGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGcttctt     >  2:3192795/1‑90 (MQ=33)                                          cGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGcttctt     <  2:604415/90‑1 (MQ=35)                                           gAAGGGGACGTATCAGTCTGCTTCGCAAGACGGCTTGCTTTTCACTCCCTATCAGACAATCTGTGTGGGCACTGCAAAGAACGCTTCttt    <  2:2546219/90‑1 (MQ=11)                                           gAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCttt    >  1:3085101/1‑90 (MQ=35)                                           gAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCttt    <  1:3119304/90‑1 (MQ=35)                                            aaGGGGACGTATCAGTCTGCTTCGCAAGCCGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTta   >  2:3004054/1‑90 (MQ=18)                                            aaGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTta   >  2:1270389/1‑90 (MQ=35)                                            aaGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTta   >  1:163810/1‑90 (MQ=35)                                             aGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTtaa  <  1:1031082/90‑1 (MQ=33)                                             aGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTtaa  <  1:993365/90‑1 (MQ=33)                                             aGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTtaa  <  2:3255767/90‑1 (MQ=35)                                             aGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTtaa  >  2:318478/1‑90 (MQ=35)                                             aGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTtaa  <  2:3023434/90‑1 (MQ=33)                                             |                                                                                          CCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACGTATCAGTCTGCTTCGCAAGACGCCTTGCTTTTCACTTCCTATCAGACAATCTGTGTGAGCACTGCAAAGAACGCTTCTTTAA  >  AC_000091/3693196‑3693329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑