| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 2763146 = | 52 (1.200) | 3 (0.080) | 3/222 | 3.4 | 5.9% | coding (85/702 nt) | yfjR | WYL domain‑containing protein |
| ? | NZ_CP009273 | 2763193 = | 48 (1.210) | coding (132/702 nt) | yfjR | WYL domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGGCACCATCTGCATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCGCACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/2763293‑2763146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcacgctGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGG > NZ_CP009273/2763193‑2763322 CGGGCACCATCTGCATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTT > 1:63573/1‑139 GGCACCATCTGCATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGC < 1:314707/139‑1 GCACCATCTGCATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCG < 2:241821/139‑1 CATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCGCACGCT < 2:778173/135‑1 GTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCG < 1:88940/78‑1 GTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCG > 2:88940/1‑78 AGATACATCAGTCGTTCACGAAAATCACGCCGCGGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCGCACGCTGCGGCGGGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACT < 1:507135/139‑1 AACTCAGCCGCCAGTTTGCGCACGCTGCGGCGTGATTT > 1:294381/1‑38 AACTCAGCCGCCAGTTTGCGCACGCTGCGGCGTGATTT < 2:294381/38‑1 TGCGCACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGG > 2:640103/1‑139 CGCACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTG > 1:9004/1‑42 CGCACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTG < 2:9004/42‑1 ACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGG < 1:241801/135‑1 ACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGG > 2:241801/1‑135 CGGGCACCATCTGCATCTCACTGCCAGCAGTGCGTAAGCGGCAGTATCCGGACTGATACTCCAGGTCCAGATACATCAGTCGTTCACGAAAATCACGCCGCAGCGTGCGCACTGACACGCCAAACTCAGCCGCCAGTTTGCGCACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/2763293‑2763146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcacgctGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGG > NZ_CP009273/2763193‑2763322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |