BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	290481 =	177 (3.850)	3 (0.070)	3/228	2.8	1.9%	coding (30/855 nt)	BW25113_RS01425	hypothetical protein
*	?	NZ_CP009273	290829 =	137 (3.190)	3 (0.070)	3/228	2.8	1.9%	coding (25/225 nt)	ykgV	helix‑turn‑helix domain‑containing protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 197 total aligned reads displayed.

TGGCATAATGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAA  >  NZ_CP009273/290345‑290617

tgaccccgaccccgagcccgaaacgtttccttctgccttcattactacccctactaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCAt                                                                                                                                        <  1:429477‑M1/3‑1 (MQ=255)

  gCATAATGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCAtct                                                                                                                                      >  2:731049/1‑139 (MQ=255)

  gCATAATGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCAtct                                                                                                                                      <  1:765688/139‑1 (MQ=255)

  gCATAATGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCAtct                                                                                                                                      <  1:358018/139‑1 (MQ=255)

   ccccgaccccgagcccgaaacgtttccttctgccttcattactacccctactaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCAtctc                                                                                                                                     >  2:84325‑M1/134‑139 (MQ=255)

       aTGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaaa                                                                                                                                 >  1:253149/1‑139 (MQ=255)

       aTGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaa                                                                                                                                  <  2:575114/138‑1 (MQ=255)

        accccgagcccgaaacgtttccttctgccttcattactacccctactaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggatac                                                                                                                                          >  2:395900‑M1/129‑129 (MQ=255)

            cAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAg                                                                                                                             >  1:294510/1‑138 (MQ=255)

            cAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAg                                                                                                                             >  1:400649/1‑138 (MQ=255)

             gagtACTCCTGGTGAAGAATAATTTTTGATCATTACTGAGTGTTTGTTTATGGGAGTTGTCTGTTCTGCCTGTAGCTCATTGTTTTTGCCTTGACAAGGTTTTGTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            <  2:455989/135‑1 (MQ=255)

             aaTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            >  1:185140/1‑138 (MQ=255)

             aaTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            <  1:332396/138‑1 (MQ=255)

              agtACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  2:132244/137‑1 (MQ=255)

              aTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  2:403804/139‑1 (MQ=255)

              aTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  2:517182/139‑1 (MQ=255)

              aTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  1:893953/139‑1 (MQ=255)

              aTTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  1:798410/139‑1 (MQ=255)

                 aCTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAaca                                                                                                                        <  2:308149/138‑1 (MQ=255)

                    aaacgtttccttctgccttcattactacccctactaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCAtc                                                                                                                                       <  2:900376‑M1/4‑1 (MQ=255)

                    aaacgtttccttctgccttcattactacccctactaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCAtc                                                                                                                                       >  1:900376‑M1/117‑120 (MQ=255)

                       aaTGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTAt                                                                                                                    >  1:819462/1‑136 (MQ=255)

                        aTGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGa                                                                                                                <  2:442704/139‑1 (MQ=255)

                        aTGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGa                                                                                                                <  2:629185/139‑1 (MQ=255)

                         tGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGa                                                                                                                >  2:454546/1‑138 (MQ=255)

                             gattgattTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACAttt                                                                                                           >  2:450283/1‑139 (MQ=255)

                             gattgattTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACAttt                                                                                                           >  1:405040/1‑139 (MQ=255)

                               ttgattTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            >  1:711409/1‑120 (MQ=255)

                               ttgattTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          >  1:841454/1‑122 (MQ=255)

                               ttgattTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  2:491670/122‑1 (MQ=255)

                                     tttGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGa                                                                                                    <  2:139972/138‑1 (MQ=255)

                                         aaCGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACct                                                                                               <  1:469366/139‑1 (MQ=255)

                                             tGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  1:305217/108‑1 (MQ=255)

                                             tGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCttt                                                                                           >  1:522500/1‑139 (MQ=255)

                                               aCTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGt                                                                                         <  2:551929/139‑1 (MQ=255)

                                               aCTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCACCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGt                                                                                         <  2:488122/139‑1 (MQ=255)

                                                    gtgtTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTAtct                                                                                    <  1:450283/139‑1 (MQ=255)

                                                    gtgtTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTAtct                                                                                    <  1:748212/139‑1 (MQ=255)

                                                    actaattcaataatgcttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCAtc                                                                                                                                       >  2:840109‑M1/85‑88 (MQ=255)

                                                             tATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATaa                                                                            <  1:775373/138‑1 (MQ=255)

                                                               tGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            >  1:861471/1‑88 (MQ=255)

                                                               tGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAac                                                                         >  1:32041/1‑139 (MQ=255)

                                                                   cttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggatac                                                                                                                                          <  2:672293‑M1/1‑1 (MQ=255)

                                                                   cttaaagctttctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggatac                                                                                                                                          >  1:672293‑M1/70‑70 (MQ=255)

                                                                     tagtCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTAt                                                                   >  1:500980/1‑139 (MQ=255)

                                                                           gTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGa                                                                                                    >  1:599960/1‑100 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaa                                                                                                                                  <  2:391692/69‑1 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaa                                                                                                                                  >  1:391692/1‑69 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGt                                                                                                                            <  2:894779/75‑1 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTAtct                                                                                    >  2:232489/1‑115 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCaa                                                                                 >  1:256579/1‑118 (MQ=255)

                                                                            tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGaaa                                                             <  2:829793/138‑1 (MQ=255)

                                                                             tctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGaaa                                                             >  2:71566‑M1/60‑137 (MQ=255)

                                                                             tctttgccaatatctcaatcactgaggtggcaaaatgagcgcattcaaactcccggataCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAAtt                                                           <  1:71566‑M1/80‑1 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaa                                                                                                                                  >  2:694798/1‑64 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCaaa                                                                                                                                  <  1:694798/64‑1 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGa                                                                                                                >  1:438842/1‑82 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCaa                                                                                 >  2:7038/1‑113 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTtct                                                        >  2:798233/1‑138 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTtct                                                        >  2:540691/1‑138 (MQ=255)

                                                                                 ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTtct                                                        <  1:875404/138‑1 (MQ=255)

                                                                                    gtgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          >  2:436529/1‑69 (MQ=255)

                                                                                    gtgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAAcc                                                                                                <  1:212724/95‑1 (MQ=255)

                                                                                    gtgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAAcc                                                                                                >  2:212724/1‑95 (MQ=255)

                                                                                    gtgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgt                                                    >  2:656431/1‑139 (MQ=255)

                                                                                    gtgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgt                                                    >  1:902533/1‑139 (MQ=255)

                                                                                     tgACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtg                                                   <  1:756932/139‑1 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAata                                                                               <  1:839310/110‑1 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAata                                                                               >  2:761038/1‑110 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                  >  2:647296/1‑139 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                  >  2:254272/1‑139 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                  >  2:380270/1‑139 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                  >  2:323047/1‑139 (MQ=255)

                                                                                      gACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                  >  1:277889/1‑139 (MQ=255)

                                                                                         tCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAacta                                                                       >  2:16228/1‑115 (MQ=255)

                                                                                         tCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAacta                                                                       <  1:16228/115‑1 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGccc                                             >  2:495247/1‑139 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGccc                                             >  1:19302/1‑139 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGccc                                             >  1:206424/1‑139 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGcc                                              <  1:314130/138‑1 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGcc                                              <  2:511646/138‑1 (MQ=255)

                                                                                           aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGcc                                              <  1:656431/138‑1 (MQ=255)

                                                                                             tGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTtct                                                        <  2:26774/126‑1 (MQ=255)

                                                                                             tGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTtct                                                        >  1:26774/1‑126 (MQ=255)

                                                                                             tGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCa                                           >  1:83309/1‑139 (MQ=255)

                                                                                                   tGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTaa                                                                                                                          <  2:299407/54‑1 (MQ=255)

                                                                                                     ccTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTtct                                    <  1:731049/138‑1 (MQ=255)

                                                                                                         gACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAaca                                                                                                                        <  1:70350/50‑1 (MQ=255)

                                                                                                              ggTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACa                          <  2:31443/139‑1 (MQ=255)

                                                                                                               gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACAt                         <  2:405040/139‑1 (MQ=255)

                                                                                                               gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACAt                         <  2:206424/139‑1 (MQ=255)

                                                                                                               gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACAt                         <  2:738160/139‑1 (MQ=255)

                                                                                                               gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACAt                         <  1:512062/139‑1 (MQ=255)

                                                                                                               gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACAt                         <  2:881056/139‑1 (MQ=255)

                                                                                                                          ggTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAAt               >  2:828947/1‑138 (MQ=255)

                                                                                                                              gAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAAt           <  2:597782/138‑1 (MQ=255)

                                                                                                                              gAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAAt           <  1:540691/138‑1 (MQ=255)

                                                                                                                               aaCGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATa          >  2:218793/1‑138 (MQ=255)

                                                                                                                                     gctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGaaa                                                             <  1:570631/81‑1 (MQ=255)

                                                                                                                                      ctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa  >  1:242294/1‑139 (MQ=255)

TGGCATAATGATCAATTACTCCTAATGAAGATTGATTTTTGAACGTGACTGAGTGTTTTTTTATGGGAGTAGTCTGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAA  >  NZ_CP009273/290345‑290617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.