Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3792729	3792779	51	4 [0]	[1] 3	waaZ	3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ

ATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGA  >  NZ_CP009273/3792682‑3792728                                               | atatTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGa  >  1:258925/1‑47 (MQ=255) atatTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGa  <  2:258925/47‑1 (MQ=255)         ttAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGa  <  1:553734/39‑1 (MQ=255)         ttAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGa  >  2:553734/1‑39 (MQ=255)                                               | ATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGA  >  NZ_CP009273/3792682‑3792728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑