Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3792729	3792779	51	4 [0]	[1] 3	waaZ	3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ

GCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTAT  >  NZ_CP009273/3792740‑3792829                                         |                                                  gCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTat  >  2:447233/1‑90 (MQ=255)                                         gATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGaa            <  1:63996/40‑1 (MQ=255)                                         gATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGaa            >  2:63996/1‑40 (MQ=255)                                         |                                                  GCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTAT  >  NZ_CP009273/3792740‑3792829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑