Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4240849	4240927	79	3 [1]	[1] 3	BW25113_RS20970	SopA family protein

TATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATA  >  NZ_CP009273/4240771‑4240863                                                                              |                tatCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATc                 <  1:161854/78‑1 (MQ=255) tatCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATc                 >  2:161854/1‑78 (MQ=255)    cAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACtata  <  2:390580/90‑1 (MQ=255)                                                                              |                TATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATA  >  NZ_CP009273/4240771‑4240863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑