Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100667	2100682	16	2 [0]	[0] 2	wzy	O16 family O‑antigen polymerase

GTTATTTCATATCCCAATAAGACCAGTGCGAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATA  >  NZ_CP009273/2100577‑2100666                                                                                          | gTTATTTCATATCCCAATAAGACCAGTGCGAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATa  <  2:242557/90‑1 (MQ=255) gTTATTTCATATCCCAATAAGACCAGTGCGAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATa  <  2:470141/90‑1 (MQ=255)                                                                                          | GTTATTTCATATCCCAATAAGACCAGTGCGAAGATGATATTAACGCATACGGCTGGATAAAATATATCCTTCTTAAGATATAAACAGATA  >  NZ_CP009273/2100577‑2100666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑