Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4240749	4240866	118	2 [0]	[1] 3	BW25113_RS20970	SopA family protein

AGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTT  >  NZ_CP009273/4240705‑4240748                                            | agtagATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGtt  <  1:659915/44‑1 (MQ=255) agtagATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGtt  >  2:659915/1‑44 (MQ=255)                                            | AGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTT  >  NZ_CP009273/4240705‑4240748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑