Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798470	3798480	11	2 [0]	[0] 2	[rfaS]	[rfaS]

AAGTTAGTTCCAGTACATACTAATAAATATTTTTATAATCCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATG  >  NZ_CP009273/3798481‑3798570 |                                                                                          aaGTTAGTTCCAGTACATACTAATAAATATTTTTATAATCCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATg  >  2:236713/1‑90 (MQ=255) aaGTTAGTTCCAGTACATACTAATAAATATTTTTATAATCCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATg  >  2:273166/1‑90 (MQ=255) |                                                                                          AAGTTAGTTCCAGTACATACTAATAAATATTTTTATAATCCTTTGCGTTGTGTTCGCTCTTTAATACGCTCGGCCTTAACGCTTGCCATG  >  NZ_CP009273/3798481‑3798570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑