New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 3495665	67 (1.410)	3 (0.070)	3/144	3.2	4.7%	intergenic (+16/‑34)	frlB/frlC	fructoselysine 6‑phosphate deglycase/fructoselysine 3‑epimerase
	?	NZ_CP009273	= 3495669	62 (1.450)					intergenic (+20/‑30)	frlB/frlC	fructoselysine 6‑phosphate deglycase/fructoselysine 3‑epimerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3495574‑3495665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcccgTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGACAGGTA  <  NZ_CP009273/3495669‑3495581                                                                                                                                                                                       CTGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCC                                                                                             <  1:1295315/90‑1  TGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCC                                                                                            >  1:265039/1‑90                                         GAACGCCGCTATTACGGTGGTCTGGTGGAATATTAAT‑CCTCTCCCGGCCCGTTGCCGGGCCGGGAGA                                                                           >  1:375182/1‑67                                         GAACGCCGCTATTACGGTGGTCTGGTGGAATATTAAT‑CCTCTCCCGGCCCGTTGCCGGGCCGGGAGA                                                                           <  2:375182/67‑1                                                           GGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTC                                   >  2:165925/1‑90                                                                                       GGCCCGTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGAC       <  2:1409820/90‑1                                                                                       GGCCCGTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGAC       >  2:302813/1‑90                                                                                         CCCGTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGACAG     <  1:115359/90‑1                                                                                            GTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGACAGGTA  >  1:952126/1‑90                                                                                            GTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGACAGGTA  >  2:991800/1‑90                                                                                                                                                                                       CTGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/3495574‑3495665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcccgTTGCCGGGCCGGGAGAGGGATTAATATTCCACCAGACCACCGTAATAGCGGCGTTCATCCGGGTTGTGATCTTTGTAAATAGACAGGTA  <  NZ_CP009273/3495669‑3495581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.