| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3495665 | 67 (1.410) | 3 (0.070) | 3/144 | 3.2 | 4.7% | intergenic (+16/‑34) | frlB/frlC | fructoselysine 6‑phosphate deglycase/fructoselysine 3‑epimerase |
| ? | NZ_CP009273 | = 3495669 | 62 (1.450) | intergenic (+20/‑30) | frlB/frlC | fructoselysine 6‑phosphate deglycase/fructoselysine 3‑epimerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATT > NZ_CP009273/3495581‑3495754 | tacCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAAc < 1:952126/90‑1 (MQ=255)tacCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAAc < 2:991800/90‑1 (MQ=255) cTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACggg > 1:115359/1‑90 (MQ=255) gTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGcc < 2:302813/90‑1 (MQ=255) gTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGcc > 2:1409820/1‑90 (MQ=255) tttACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGAtt < 1:307464/90‑1 (MQ=255) ttACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGAttt < 2:832088/90‑1 (MQ=255) aaaGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGc > 2:261048/1‑90 (MQ=255) aaaGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCCCTCCCGGCCCGGCAACGGGCCGGATTTACGc > 1:1009765/1‑90 (MQ=255) aGATCACAACCCGGATGAACGCCGCTAATACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa < 2:1402248/90‑1 (MQ=255) aTCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAgg > 1:179746/1‑90 (MQ=255) acaACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGt < 2:265039/90‑1 (MQ=255) cccGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTAcc < 1:1409820/90‑1 (MQ=255) cccGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTAcc < 1:765074/90‑1 (MQ=255) cGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTAcc < 2:246453/88‑1 (MQ=255) cGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTAcc > 1:246453/1‑88 (MQ=255) cGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCg > 2:1178292/1‑90 (MQ=255) cGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCCCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCg < 2:1009765/90‑1 (MQ=255) cGGATGAACGCCGCTATTACGGCGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCg > 1:10843/1‑90 (MQ=255) ggATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGa > 2:1232190/1‑90 (MQ=255) aaCGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGaaa < 2:678593/90‑1 (MQ=255) gcTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGt > 2:1254206/1‑90 (MQ=255) cTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTa < 2:584209/90‑1 (MQ=255) ggtggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa < 1:1388110/59‑1 (MQ=255) ggtggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa > 2:1388110/1‑59 (MQ=255) ggtggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAc > 2:479084/1‑90 (MQ=255) ggtggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAc > 2:21031/1‑90 (MQ=255) gtggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAcc < 2:524083/90‑1 (MQ=255) tggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa > 1:456557/1‑57 (MQ=255) tggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa < 2:456557/57‑1 (MQ=255) tggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg > 2:165067/1‑79 (MQ=255) tggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg < 1:165067/79‑1 (MQ=255) ggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTg > 2:144295/1‑90 (MQ=255) ggtCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTg > 2:1279697/1‑90 (MQ=255) tCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa < 2:1256192/54‑1 (MQ=255) tCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa > 1:1256192/1‑54 (MQ=255) tCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGt > 2:447843/1‑81 (MQ=255) tCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGt < 1:447843/81‑1 (MQ=255) ggtggAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGcc > 1:1182489/1‑90 (MQ=255) gtggAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGcca < 1:21031/90‑1 (MQ=255) ggAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa > 2:940804/1‑48 (MQ=255) ggAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCaa < 1:940804/48‑1 (MQ=255) ggAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGccacc > 1:1305053/1‑90 (MQ=255) aaTATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGAttt > 2:892838/1‑40 (MQ=255) aaTATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGAttt < 1:892838/40‑1 (MQ=255) aaTATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGt < 2:961661/51‑1 (MQ=255) aaTATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGt > 1:961661/1‑51 (MQ=255) aaTATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAg > 2:714325/1‑90 (MQ=255) tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCt > 2:842002/1‑90 (MQ=255) tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCt > 2:1189134/1‑90 (MQ=255) tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGGATGTTTACCTGCGGCCACCAGCGGCt > 1:1116003/1‑90 (MQ=255) aaTCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTg < 1:665933/90‑1 (MQ=255) aaTCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTg < 1:479084/90‑1 (MQ=255) aaTCCCTCGCCCGGCCGGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTg < 1:7113/90‑1 (MQ=255) ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg > 2:506474/1‑57 (MQ=255) ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg < 1:506474/57‑1 (MQ=255) ctctCCCGGACCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTAt > 2:117204/1‑90 (MQ=255) tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGc < 1:1332927/79‑1 (MQ=255) tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGc > 2:1332927/1‑79 (MQ=255) tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTAtt > 1:1310694/1‑90 (MQ=255) ctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTg > 2:386081/1‑90 (MQ=255) ctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTg > 1:334638/1‑90 (MQ=255) ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg < 1:1219845/50‑1 (MQ=255) ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAgg > 2:1219845/1‑50 (MQ=255) ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAacac > 2:522228/1‑90 (MQ=255) ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAacac > 2:1501093/1‑90 (MQ=255) ggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCAtt > 1:327275/1‑90 (MQ=255) | TACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATT > NZ_CP009273/3495581‑3495754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |