Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1378817	1378826	10	3 [1]	[0] 2	ycjX	YcjX family protein

TGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTA  >  NZ_CP009273/1378827‑1378916 |                                                                                          tGGTCGCGCCAGGTGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTa  >  1:179170/1‑90 (MQ=255) tGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTa  >  1:117575/1‑90 (MQ=255) |                                                                                          TGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTA  >  NZ_CP009273/1378827‑1378916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑