Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241449	4241450	2	3 [0]	[0] 3	BW25113_RS20970	SopA family protein

AATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGA  >  NZ_CP009273/4241359‑4241448                                                                                          | aaTGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGa  <  1:320997/90‑1 (MQ=255)                                             aaTTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGa  <  1:329301/46‑1 (MQ=255)                                             aaTTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGa  >  2:329301/1‑46 (MQ=255)                                                                                          | AATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGA  >  NZ_CP009273/4241359‑4241448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑