New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 2282398 =NA (NA)115 (2.090) 42/166 0.1 98.3% pseudogene (3/2532 nt) yejO autotransporter YejO
?NZ_CP009273 = 3629062 2 (0.040)coding (862/1053 nt) yhiM DUF2776 domain‑containing protein

Only 100 of 115 total aligned reads displayed.

CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/2282486‑2282398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  <  NZ_CP009273/3629062‑3628976
                                                                                                                                                                                
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  1:926502/90‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  1:585904/90‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  2:1081437/90‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCC                                                                                        <  2:417591/90‑1
 ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:1611099/1‑90
 ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:139743/1‑90
 ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT                                                                                       >  1:614290/1‑90
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAATTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      <  1:519509/90‑1
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  2:1410105/1‑90
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:226700/1‑90
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      <  2:1009640/90‑1
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:1288502/1‑90
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  1:376178/1‑90
  TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA                                                                                      >  2:907871/1‑90
   TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                     <  2:1014396/90‑1
   TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAA                                                                                     <  2:803071/90‑1
    TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGTCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                    <  1:1038030/90‑1
    TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                    <  1:1003640/90‑1
    TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                    <  2:851089/90‑1
       GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAA                                                                                 >  1:1213805/1‑90
        GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAAC                                                                                <  1:863151/90‑1
         GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACA                                                                               <  2:314207/90‑1
            AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGT                                                                            <  1:687240/90‑1
             AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTA                                                                           >  1:185434/1‑90
              AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCGCCTTCCCTAACGAACAGGTAC                                                                          <  2:1198894/90‑1
              AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTAC                                                                          <  1:1437782/90‑1
              AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTAC                                                                          <  2:1399761/90‑1
              AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTAC                                                                          <  1:1347500/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  1:1455580/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  1:1581698/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:124793/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:287253/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:587862/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  2:815279/90‑1
               AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  1:1010843/90‑1
                 ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTC                                                                       <  1:1321940/90‑1
                            CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGT                                                            <  1:1364969/90‑1
                            CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGT                                                            <  1:709888/90‑1
                            CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGT                                                            <  1:696591/90‑1
                              TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGC                                                          >  1:837893/1‑90
                                    AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAG                                                    >  2:835500/1‑90
                                    AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCA                                                                   >  1:1515945/1‑75
                                    AATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCA                                                                   <  2:1515945/75‑1
                                      TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAAC                                                                                <  1:879076/60‑1
                                      TGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAAC                                                                                >  2:879076/1‑60
                                       GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCA                                                 <  1:983489/90‑1
                                        AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAG                                                <  2:837893/90‑1
                                        AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAG                                                <  1:9194/90‑1
                                        AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAG                                                <  2:115901/90‑1
                                         AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGA                                               <  1:454486/90‑1
                                         AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGA                                               <  1:1013098/90‑1
                                          ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGAC                                              <  1:1242583/90‑1
                                            GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTT                                            <  1:1203678/90‑1
                                            GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTT                                            >  2:612290/1‑90
                                            GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTT                                            >  2:357342/1‑90
                                              CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          >  1:303974/1‑90
                                              CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          <  1:1249601/90‑1
                                              CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          >  1:178068/1‑90
                                              CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTT                                          >  1:1466893/1‑90
                                                GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGA                                        >  2:922518/1‑90
                                                GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                    <  2:1238973/46‑1
                                                GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAC                                                                                    >  1:1238973/1‑46
                                                  GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGA                                      >  1:1580057/1‑90
                                                  GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAG                                                >  1:405091/1‑80
                                                  GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAG                                                <  2:405091/80‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:1149410/90‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:871947/90‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:827636/90‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:681086/90‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:614290/90‑1
                                                    CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAAT                                    <  2:1423991/90‑1
                                                      gaCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  >  2:211086/3‑90
                                                      GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  1:650573/90‑1
                                                      GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  1:1117883/90‑1
                                                      GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATAT                                  <  2:359785/90‑1
                                                        CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:257018/90‑1
                                                        CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:717942/90‑1
                                                         GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCT                               <  1:1201459/90‑1
                                                         GAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCT                               <  2:1420971/90‑1
                                                          AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         <  1:1498733/47‑1
                                                          AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACG                                                                         >  2:1498733/1‑47
                                                             AGAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAA                           <  2:857588/90‑1
                                                              GAATTTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAAC                          <  1:330179/90‑1
                                                                  TTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGAT                      <  1:214395/90‑1
                                                                  TTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGAT                      <  1:337182/90‑1
                                                                  TTCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGAT                      <  2:102453/90‑1
                                                                   TCCCCGCTTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATC                     >  2:836170/1‑90
                                                                          TTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGA              <  2:1018285/90‑1
                                                                          TTATTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGA              <  1:815788/90‑1
                                                                             TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  1:1440740/90‑1
                                                                             TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  2:1013978/90‑1
                                                                             TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  1:1337742/90‑1
                                                                             TTCGCACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGC           <  1:1355751/90‑1
                                                                                  ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATA      <  1:922518/90‑1
                                                                                  ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCAAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATA      <  1:1110014/90‑1
                                                                                  ACCTTCCCTAACGAACAGGTACGTCTCCATACCAGT                                                            >  2:115558/1‑36
                                                                                     TTCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATA      <  1:1076246/87‑1
                                                                                      TCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  >  2:887657/1‑90
                                                                                      TCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                <  2:1503999/60‑1
                                                                                      TCCCTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGC                                >  1:1503999/1‑60
                                                                                                                                                                                
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/2282486‑2282398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACGAACAGGTACGTCTCCATACCAGTGCCAGTAGCCAGACTTTTGAGAATATGCTGTAACAGATCATTCCGAGGCAAATAAGAA  <  NZ_CP009273/3629062‑3628976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.