Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100079	2100148	70	2 [1]	[1] 3	wzy	O16 family O‑antigen polymerase

GCCATCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTC  >  NZ_CP009273/2099989‑2100079                                                                                          |  gCCATCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTAct   <  2:35007/90‑1 (MQ=255)  ccATCCCCCCAGGCAGTCCACGTAAAAGGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTActc  <  2:223565/90‑1 (MQ=255)                                                                                          |  GCCATCCCCCCAGGCAGTCCACGTAAAAAGAGCATATACAAGGAGAATAGAACACCTACAGCTGTAATAAGATAAACATAATGTTTTACTC  >  NZ_CP009273/2099989‑2100079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑