Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2779873	2779892	20	2 [0]	[0] 2	BW25113_RS26005	alpha‑amylase family glycosyl hydrolase

GACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAAC  >  NZ_CP009273/2779828‑2779872                                             | gACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAAc  >  1:85229/1‑45 (MQ=255) gACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAAc  <  2:85229/45‑1 (MQ=255)                                             | GACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAAC  >  NZ_CP009273/2779828‑2779872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑