Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4212368	4212409	42	2 [0]	[0] 4	espL4	type III secretion system effector EspL4

CAATTCACTCAGGGTTTGGTGTTCATTTGTCTGGGCTGT  >  NZ_CP009273/4212329‑4212367                                       | cAATTCACTCAGGGTTTGGTGTTCATTTGTCTGGGCTGt  <  1:17141/39‑1 (MQ=255) cAATTCACTCAGGGTTTGGTGTTCATTTGTCTGGGCTGt  >  2:17141/1‑39 (MQ=255)                                       | CAATTCACTCAGGGTTTGGTGTTCATTTGTCTGGGCTGT  >  NZ_CP009273/4212329‑4212367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑